RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 H3BP45 60 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ALOX5APP20292 161 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 MAGEB1P43366 347 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 DSCR4P56555 118 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 TAS2R46P59540 309 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 RHOBP62745 196 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ETFDHQ16134 617 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 GSG1Q2KHT4 349 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF419Q96HQ0 510 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 S1PR3Q99500 378 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 TNFRSF12AQ9NP84 129 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 LMO7DNF2Z398 122 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 SELEP16581 610 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 DIO1P49895 249 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 UBE2G2P60604 165 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ACSM1Q08AH1 577 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OR5I1Q13606 314 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 L3MBTL4Q8NA19 623 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 OR56B4Q8NH76 319 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 SLC7A6Q92536 515 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF707Q96C28 371 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-201ENST00000303354 PBOV1Q9GZY1 135 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 PDFQ9HBH1 243 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 SLCO1C1Q9NYB5 712 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 DOK5Q9P104 306 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 BTAF1O14981 1849 aa7.05□□□□□ -1.28
SCN9A-201ENST00000303354 TCAPO15273 167 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TNFSF14O43557 240 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 RGS11O94810 467 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SOD1P00441 154 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ETV1P50549 477 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 MFGE8Q08431 387 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SELENBP1Q13228 472 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 HFEQ30201 348 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SYT6Q5T7P8 510 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 DHRS9Q9BPW9 319 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ADAM10O14672 748 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 UBCP0CG48 685 aaKnown RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 HLA-DOBP13765 273 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SLC6A12P48065 614 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 B4GALNT1Q00973 533 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 LRRC10Q5BKY1 277 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TIPARPQ7Z3E1 657 aaKnown RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 NAA40Q86UY6 237 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 C1orf87Q8N0U7 546 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 DPF1Q92782 380 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TEAD3Q99594 435 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SOX7Q9BT81 388 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 CLCF1Q9UBD9 225 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TMPRSS2O15393 492 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TXNL1O43396 289 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 RPS2P15880 293 aaKnown RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TNFAIP6P98066 277 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SYT14P1Q58G82 188 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SFXN4Q6P4A7 337 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 C17orf107Q6ZR85 190 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ABHD11Q8NFV4 315 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 OR2A14Q96R47 310 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF251Q9BRH9 671 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 LRFN3Q9BTN0 628 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 LHX9Q9NQ69 397 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 A0A087WV62 115 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TRAV17A0A0B4J275 112 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 KRBOX1C9JBD0 128 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 HLA-HP01893 362 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 CELA2AP08217 269 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TFPI2P48307 235 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SAXO2Q658L1 398 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 STEAP1BQ6NZ63 245 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 OR1S2Q8NGQ3 325 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 CNTNAP3Q9BZ76 1288 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 CRISPLD2Q9H0B8 497 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 V9GYS6 101 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 IGHV1OR21-1A0A087WYE8 117 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SLC22A23A1A5C7 686 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ARNTLO00327 626 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 MEF2DQ14814 521 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 Q6ZNB5 142 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 Q6ZRG5 221 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 NEURL3Q96EH8 262 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 ABHD14AQ9BUJ0 271 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 CCDC32Q9BV29 185 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TEX101Q9BY14 249 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 UBQLN3Q9H347 655 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 BCO1Q9HAY6 547 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 POMT2Q9UKY4 750 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 EIF4E2O60573 245 aaKnown RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 EML2O95834 649 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 FCER1GP30273 86 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 PPT1P50897 306 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 KIRREL2Q6UWL6 708 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SLC35E1Q96K37 410 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 PFDN5Q99471 154 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 CYR61O00622 381 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 COX6B1P14854 86 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 OR51S1Q8NGJ8 323 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 OR10D3Q8NH80 312 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 A0A1B0GTH9 108 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 MED19A0JLT2 244 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms