RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PCBP4P57723 403 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 TOMM20LQ6UXN7 152 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 MOB3BQ86TA1 216 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 YRDCQ86U90 279 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 CMTM4Q8IZR5 234 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 C17orf78Q8N4C9 275 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 OR5M11Q96RB7 305 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 ROBO1Q9Y6N7 1651 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 C5orf49A4QMS7 147 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 HELTA6NFD8 242 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 M0QZQ0 153 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 GPR31O00270 319 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 TOX3O15405 576 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 CD37P11049 281 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 ETFDHQ16134 617 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 SCD5Q86SK9 330 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 VASH2Q86V25 355 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 RPS19BP1Q86WX3 136 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 ERGIC1Q969X5 290 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 CACFD1Q9UGQ2 172 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 NAGKQ9UJ70 344 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 A0A087WV62 115 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 C1SP09871 688 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 CSNK1DP48730 415 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 PPP1CBP62140 327 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 FAM3AP98173 230 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 BCDIN3DQ7Z5W3 292 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 LRRTM3Q86VH5 581 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 WDR31Q8NA23 367 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 ST8SIA4Q92187 359 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 Q96M85 177 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 EMC6Q9BV81 110 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF768Q9H5H4 540 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 PLEKHA2Q9HB19 425 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 A0A1B0GTQ1 180 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 LRP3O75074 770 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 GYPAP02724 150 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 SLC10A3P09131 477 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 ABCD3P28288 659 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 PCSK6P29122 969 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 APOBEC1P41238 236 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 SNRPGP62308 76 aaKnown RBP9.48□□□□□ -0.89
CLIP1-201ENST00000302528 RHOBP62745 196 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 PRDX4Q13162 271 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 RNF212Q495C1 297 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 THEM4Q5T1C6 240 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 OR1A1Q9P1Q5 309 aa9.48□□□□□ -0.89
CLIP1-201ENST00000302528 TRGV8A0A0C4DH27 118 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 A0A1B0GTW7 788 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 FAM221AA4D161 298 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 SYT5O00445 386 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 CTNSO60931 367 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 PRKRAO75569 313 aaKnown RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 FAM157BP0CG42 384 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 PSMB6P28072 239 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 EPHA2P29317 976 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 DUSP2Q05923 314 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 OR1L4Q8NGR5 311 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 LILRB1Q8NHL6 650 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 EDEM2Q9BV94 578 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 PTDSS2Q9BVG9 487 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 SLAMF8Q9P0V8 285 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 TLCD2A6NGC4 264 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 SDCBPO00560 298 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF749O43361 778 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 FKBP2P26885 142 aaKnown RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 BTG1P62324 171 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 SIRT6Q8N6T7 355 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 NXPE3Q969Y0 559 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 CHST6Q9GZX3 395 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 URB1O60287 2271 aaKnown RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 DNASE2O00115 360 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 PTGESO14684 152 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 QDPRP09417 244 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF628Q5EBL2 1059 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 STUMQ69YW2 141 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 POM121L2Q96KW2 1035 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 JAM3Q9BX67 310 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 MAGT1Q9H0U3 335 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 NWD2Q9ULI1 1742 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 A0A1B0GX78 115 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 GFRA2O00451 464 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 EIF4E2O60573 245 aaKnown RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 OR2J2O76002 312 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 ONECUT2O95948 504 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 OPRM1P35372 400 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 DHODHQ02127 395 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF154Q13106 437 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 LAIR1Q6GTX8 287 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 C6orf15Q6UXA7 325 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 BTNL3Q6UXE8 466 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 LILRA2Q8N149 483 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 OR5A2Q8NGI9 324 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms