RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 TMEM82A0PJX8 343 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 WIPF3A6NGB9 483 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 APOC3P02656 99 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CDAP32320 146 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 TAS2R19P59542 299 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 ACTBP60709 375 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 ACTG1P63261 375 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 SHEQ5VZ18 495 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CARD17Q5XLA6 110 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 PAPD4Q6PIY7 484 aaKnown RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 GVQW1Q8N7I0 195 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 NFAM1Q8NET5 270 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 OR5M9Q8NGP3 310 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 MFSD8Q8NHS3 518 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 ADAT3Q96EY9 351 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CYYR1Q96J86 154 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CHST11Q9NPF2 352 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 FSCN3Q9NQT6 498 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 SLC17A5Q9NRA2 495 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CEP192Q8TEP8 1941 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 COL5A1P20908 1838 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 A6NIZ1 184 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 FAM74A7A6NL05 159 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 D6RAR5 112 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CYB5AP00167 134 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 RLN2P04090 185 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 ITGB2P05107 769 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 OR4E1P0C645 316 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 SLC2A1P11166 492 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 FSTP19883 344 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 DAP3P51398 398 aaKnown RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 AFF3P51826 1226 aaKnown RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 RAP1BP61224 184 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 RAP1AP62834 184 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 MFAP5Q13361 173 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF169Q14929 603 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CDH26Q8IXH8 852 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 PDZD9Q8IXQ8 264 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 TDHQ8IZJ6 230 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 CHST4Q8NCG5 386 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 OR10G3Q8NGC4 313 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 OR1J2Q8NGS2 313 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 SLC6A7Q99884 636 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF768Q9H5H4 540 aaKnown RBP11.49□□□□□ -0.57
HIF3A-204ENST00000300862 SEC61A2Q9H9S3 476 aa11.49□□□□□ -0.57
HIF3A-204ENST00000300862 FREM2Q5SZK8 3169 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 A0A1W2PNR3 127 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 VSTM2BA6NLU5 285 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF736B4DX44 427 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 SPDEFO95238 335 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 HPP00738 406 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 PLATP00750 562 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 ACHEP22303 614 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 ANOS1P23352 680 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 PI4KAP42356 2102 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 B2MP61769 119 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 OR52W1Q6IF63 320 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 RHBDD2Q6NTF9 364 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 DNM1P34Q6PK57 102 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 BPIFB2Q8N4F0 458 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 RELL2Q8NC24 303 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 OR10S1Q8NGN2 331 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 ST8SIA1Q92185 356 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 SLAMF6Q96DU3 332 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 SERINC1Q9NRX5 453 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 LIPT2A6NK58 231 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 LDLRAD4O15165 306 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 TTRP02766 147 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 KLK2P20151 261 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 APOBEC1P41238 236 aaKnown RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 MYBPHQ13203 477 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 SMAD4Q13485 552 aaKnown RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 LCN10Q6JVE6 187 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 GUSBP11Q6P575 273 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 ARL6IP6Q8N6S5 226 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 CLRN3Q8NCR9 226 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 NUDCD2Q8WVJ2 157 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 DDIT4LQ96D03 193 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 PCDHB16Q9NRJ7 776 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 SEMA5BQ9P283 1151 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
HIF3A-204ENST00000300862 GDF2Q9UK05 429 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-204ENST00000300862 TTLL8A6PVC2 850 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 CCSO14618 274 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 GDF9O60383 454 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 OR2J2O76002 312 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 ISG15P05161 165 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF735P0CB33 412 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 FOSL2P15408 326 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 MPGP29372 298 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 PRKXP51817 358 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 SHBQ15464 509 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 ATPAF1Q5TC12 328 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms