RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 APH1BQ8WW43 257 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FBXW5Q969U6 566 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC35E1Q96K37 410 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TECTBQ96PL2 329 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PBOV1Q9GZY1 135 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 M0R135 149 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 H2AFB1P0C5Y9 115 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC25A6P12236 298 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 METAP1P53582 386 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TAF9Q16594 264 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF620Q6ZNG0 422 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MENTQ9BUN1 341 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 EIF4E2O60573 245 aaKnown RBP12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FCGR2CP31995 323 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KIR2DL3P43628 341 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ISL1P61371 349 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 H3F3CQ6NXT2 135 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CREB3L2Q70SY1 520 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 AKR7LQ8NHP1 331 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM30AQ9NV96 361 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLCO1C1Q9NYB5 712 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TIMM10BQ9Y5J6 103 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 K7EQM0 130 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ARPC3O15145 178 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR2J3O76001 311 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RAB13P51153 203 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 AGBL4Q5VU57 503 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PROCRQ9UNN8 238 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TRGV8A0A0C4DH27 118 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TEX51A0A1B0GUA7 166 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GLAP06280 429 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CCR2P41597 374 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DOC2BQ14184 412 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OTUD1Q5VV17 481 aaPredicted RBP12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OLIG1Q8TAK6 271 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 BAHD1Q8TBE0 780 aaPredicted RBP12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SULT1C4O75897 302 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 AKR1C3P42330 323 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PLXDC2Q6UX71 529 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR2AE1Q8NHA4 323 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 A0A1B0GTL3 188 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 UMAD1C9J7I0 102 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR2F2O95006 317 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GPM6AP51674 278 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MARCH1Q8TCQ1 289 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MRGPRX1Q96LB2 322 aa12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF331Q9NQX6 463 aaPredicted RBP12.32□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SPNP16150 400 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PXDC1Q5TGL8 231 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FAM122AQ96E09 287 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ATF6BQ99941 703 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MED18Q9BUE0 208 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GPR171O14626 319 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CD3DP04234 171 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CCL7P80098 99 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PMP22Q01453 160 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC38A9Q8NBW4 561 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR10V1Q8NGI7 309 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNRF4Q8WWF5 429 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CMBLQ96DG6 245 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SPNS1Q9H2V7 528 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLCO5A1Q9H2Y9 848 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GFYI3L273 518 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 UPK1AO00322 258 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 AKR7A2O43488 359 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LRP3O75074 770 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TBPP20226 339 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CD22P20273 847 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF121P58317 390 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR2B8PP59922 312 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZXDAP98168 799 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM240Q5SV17 173 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR5B3Q8NH48 314 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LYSMD1Q96S90 227 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PDZK1IP1Q13113 114 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SSX7Q7RTT5 188 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MRPS24Q96EL2 167 aaKnown RBP12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SOX7Q9BT81 388 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF195O14628 629 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CHEK1O14757 476 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR7C2O60412 319 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms