RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CHST6Q9GZX3 395 aa8.28□□□□□ -1.08
PRDM9-201ENST00000296682 PBOV1Q9GZY1 135 aa8.28□□□□□ -1.08
PRDM9-201ENST00000296682 GPN1Q9HCN4 374 aaPredicted RBP8.28□□□□□ -1.08
PRDM9-201ENST00000296682 GGT3PA6NGU5 568 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 CREBL2O60519 120 aaPredicted RBP8.27□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF432O94892 652 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 TXNDC12O95881 172 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 RAB40ALP0C0E4 278 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 SELENOPP49908 381 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 ZMYND11Q15326 602 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF584Q8IVC4 421 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 OR2AE1Q8NHA4 323 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 NUBPLQ8TB37 319 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 RAB40AQ8WXH6 277 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 SNX18Q96RF0 628 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 FBXO4Q9UKT5 387 aa8.27□□□□□ -1.08
PRDM9-201ENST00000296682 A0A096LPE4 126 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 LOC100289279A0A1B0GTE1 492 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 A0A1W2PPZ6 126 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 TMEM200CA6NKL6 621 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ADAM10O14672 748 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 TO15178 435 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF205O95201 554 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ACSM4P0C7M7 580 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF93P35789 620 aaPredicted RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 RAB14P61106 215 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 TIGD3Q6B0B8 471 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 RNF144BQ7Z419 303 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 WDSUB1Q8N9V3 476 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 BOLLQ8N9W6 283 aaKnown RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 OR4D6Q8NGJ1 314 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 OR5D14Q8NGL3 314 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 TTC9Q92623 222 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ADAT3Q96EY9 351 aaPredicted RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ELMOD3Q96FG2 381 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 MRGPRX4Q96LA9 322 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF701Q9NV72 531 aaPredicted RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 SLC23A1Q9UHI7 598 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 R4GMQ9 66 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 MYO7BQ6PIF6 2116 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 TMEM272A0A1B0GTI8 110 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 A0A1W2PQ72 361 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF736B4DX44 427 aaPredicted RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 CTAG2O75638 210 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ABHD16AO95870 558 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ECDO95905 644 aaPredicted RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 B4GALT1P15291 398 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 BDKRB2P30411 391 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 CX3CR1P49238 355 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 GNG2P59768 71 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 STEAP1BQ6NZ63 245 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 RHOUQ7L0Q8 258 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 OR2M3Q8NG83 312 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 AKR7LQ8NHP1 331 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF519Q8TB69 540 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
PRDM9-201ENST00000296682 HYLS1Q96M11 299 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF416Q9BWM5 594 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 CNTD2Q9H8S5 307 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 RHBDD3Q9Y3P4 386 aa8.27□□□□□ -1.09
PRDM9-201ENST00000296682 A0A0G2JMM0 328 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 A0A1W2PPB8 328 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 A0A1W2PRS3 328 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 KIR3DP1A8MWS1 328 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF208O43345 1280 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF254O75437 659 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 PMP2P02689 132 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 TMEM225BP0DP42 221 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 PGAM2P15259 253 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 RAB3AP20336 220 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 GABRR1P24046 479 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 CARD18P57730 90 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 C3AR1Q16581 482 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 GLIPR1L1Q6UWM5 242 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 TMPPEQ6ZT21 453 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 BTN2A1Q7KYR7 527 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 BPIFB2Q8N4F0 458 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 BMPERQ8N8U9 685 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 POC1BQ8TC44 478 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 RABL2AQ9UBK7 228 aaPredicted RBP8.26□□□□□ -1.09
PRDM9-201ENST00000296682 RABL2BQ9UNT1 228 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 PCDHGA5Q9Y5G8 931 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 PRR14LQ5THK1 2151 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 SPTAN1Q13813 2472 aaKnown RBP8.26□□□□□ -1.09
PRDM9-201ENST00000296682 LY6G6EA0A0G2JKS1 128 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 EEF1E1-BLOC1S5C9J1V9 151 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 L7N2F9 121 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ONECUT2O95948 504 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 FAHP16930 419 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 CSRP1P21291 193 aaKnown RBP8.26□□□□□ -1.09
PRDM9-201ENST00000296682 GSG1Q2KHT4 349 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 RNASE10Q5GAN6 216 aaKnown RBP8.26□□□□□ -1.09
PRDM9-201ENST00000296682 TRAPPC6BQ86SZ2 158 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 LRRTM1Q86UE6 522 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 PHYHIPQ92561 330 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 HES7Q9BYE0 225 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms