RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 KLK13Q9UKR3 277 aa13.41□□□□□ -0.26
CCDC116-201ENST00000292779 R4GN57 208 aa13.41□□□□□ -0.26
CCDC116-201ENST00000292779 MED12Q93074 2177 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 A0A1W2PPL8 197 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 TMEM235A6NFC5 223 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 RGS11O94810 467 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 CYB5AP00167 134 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 PDGFAP04085 211 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 AMY2AP04746 511 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 GNALP38405 381 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 SLC25A53Q5H9E4 307 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 KLHL24Q6TFL4 600 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 ZNF813Q6ZN06 617 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 C17orf50Q8WW18 174 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 CRB3Q9BUF7 120 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 MRPL13Q9BYD1 178 aaKnown RBP13.4□□□□□ -0.26
CCDC116-201ENST00000292779 PBOV1Q9GZY1 135 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 SLCO5A1Q9H2Y9 848 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 C1orf198Q9H425 327 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 UPB1Q9UBR1 384 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 WIF1Q9Y5W5 379 aa13.4□□□□□ -0.26
CCDC116-201ENST00000292779 A0A0A6YYH2 397 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 TMEM82A0PJX8 343 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 A6NJ64 397 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 I3L521 148 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 SHOXO15266 292 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 ZFAND5O76080 213 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 MELTFP08582 738 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 MSX1P28360 303 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 LAP3P28838 519 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 BDKRB2P30411 391 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 NHLRC3Q5JS37 347 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 SFRP5Q5T4F7 317 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 C11orf88Q6PI97 169 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 RFPL4BQ6ZWI9 263 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 TMED4Q7Z7H5 227 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 OR52N4Q8NGI2 321 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 PTX4Q96A99 478 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
CCDC116-201ENST00000292779 ADAT3Q96EY9 351 aaPredicted RBP13.39□□□□□ -0.27
CCDC116-201ENST00000292779 ALX4Q9H161 411 aaPredicted RBP13.39□□□□□ -0.27
CCDC116-201ENST00000292779 SDHAF3Q9NRP4 125 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 FXYD6-FXYD2A0A087WZ82 144 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 A0A1W2PNR3 127 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 WIPF3A6NGB9 483 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 OR6C65A6NJZ3 312 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 HMSDA8MTL9 139 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 ZNF736B4DX44 427 aaPredicted RBP13.39□□□□□ -0.27
CCDC116-201ENST00000292779 SYT7O43581 403 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 OR4E1P0C645 316 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 ZNF735P0CB33 412 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 RRASP10301 218 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 ZNF28P17035 718 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 RAB6AP20340 208 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 CLRN1P58418 232 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 GPR85P60893 370 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
CCDC116-201ENST00000292779 CFAP77Q6ZQR2 320 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 UEVLDQ8IX04 471 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 CDH26Q8IXH8 852 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 OR1J2Q8NGS2 313 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 FXYD6Q9H0Q3 95 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 FBXL2Q9UKC9 423 aa13.39□□□□□ -0.27
CCDC116-201ENST00000292779 FARSAQ9Y285 508 aaKnown RBP13.39□□□□□ -0.27
CCDC116-201ENST00000292779 GDF9O60383 454 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 SNAPC5O75971 98 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 PMS2P2O95744 297 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 ZNF250P15622 560 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 POU3F2P20265 443 aaPredicted RBP13.38□□□□□ -0.27
CCDC116-201ENST00000292779 S100A11P31949 105 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 HLXQ14774 488 aaPredicted RBP13.38□□□□□ -0.27
CCDC116-201ENST00000292779 MPPED2Q15777 294 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 AANATQ16613 207 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 THEM4Q5T1C6 240 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 B3GNTL1Q67FW5 361 aaPredicted RBP13.38□□□□□ -0.27
CCDC116-201ENST00000292779 TMUB2Q71RG4 321 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 GPAT4Q86UL3 456 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 BPIFB2Q8N4F0 458 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 PAQR4Q8N4S7 273 aaPredicted RBP13.38□□□□□ -0.27
CCDC116-201ENST00000292779 OR4S1Q8NGB4 309 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 CCDC107Q8WV48 283 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 CMBLQ96DG6 245 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
CCDC116-201ENST00000292779 GAREM1Q9H706 876 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 PTGES2Q9H7Z7 377 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 SEC61A2Q9H9S3 476 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 OCIAD1Q9NX40 245 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 RAB22AQ9UL26 194 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 LHFPL6Q9Y693 200 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 DMXL1Q9Y485 3027 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 IGLV3-32A0A0A0MS00 114 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 METTL21EPA6NDL7 271 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 CD74P04233 296 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 PGA4P0DJD7 388 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 PGA3P0DJD8 388 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 HSD11B1P28845 292 aa13.38□□□□□ -0.27
CCDC116-201ENST00000292779 CDAP32320 146 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms