RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 MMP15P51511 669 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 CDH15P55291 814 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 LSM6P62312 80 aaKnown RBP8.3□□□□□ -1.08
CCDC58-201ENST00000291458 CRMP1Q14194 572 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 FLOT2Q14254 428 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 MOGQ16653 247 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 HFEQ30201 348 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 OR2T2Q6IF00 324 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 ADGRG5Q8IZF4 528 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 SLC37A3Q8NCC5 494 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 OR6K6Q8NGW6 343 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 OR2AJ1Q8NGZ0 328 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 TEX47Q8TBZ9 253 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 ITLN1Q8WWA0 313 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 CMBLQ96DG6 245 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 GAL3ST1Q99999 423 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 NIPSNAP1Q9BPW8 284 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 CHID1Q9BWS9 393 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 HDHD2Q9H0R4 259 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 MED20Q9H944 212 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 MRPL22Q9NWU5 206 aaKnown RBP8.3□□□□□ -1.08
CCDC58-201ENST00000291458 WIPI2Q9Y4P8 454 aa8.3□□□□□ -1.08
CCDC58-201ENST00000291458 DHRS12A0PJE2 317 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 E2F6O75461 281 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 IFNA2P01563 188 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 FAM157CP0CG43 387 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 RAP2AP10114 183 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 CLUP10909 449 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ZNF823P16415 610 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 MICAQ29983 383 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 SLC36A3Q495N2 470 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 DNAL1Q4LDG9 190 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ZMAT1Q5H9K5 638 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ZNF770Q6IQ21 691 aaPredicted RBP8.29□□□□□ -1.08
CCDC58-201ENST00000291458 SLC18B1Q6NT16 456 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 RPL13AP3Q6NVV1 102 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 PGM2L1Q6PCE3 622 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 Q6ZR03 302 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 RASSF6Q6ZTQ3 369 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 TMEM179BQ7Z7N9 219 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 GLCCI1Q86VQ1 547 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 HS3ST5Q8IZT8 346 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 LNX2Q8N448 690 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ATG16L2Q8NAA4 619 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 GJC3Q8NFK1 279 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 GIPC3Q8TF64 312 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 CANT1Q8WVQ1 401 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ZNRF4Q8WWF5 429 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 TIMD4Q96H15 378 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ATF6BQ99941 703 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 EGLN1Q9GZT9 426 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 ZNF665Q9H7R5 613 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 TBCCD1Q9NVR7 557 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 PDP1Q9P0J1 537 aaPredicted RBP8.29□□□□□ -1.08
CCDC58-201ENST00000291458 LPAR3Q9UBY5 353 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 COMMD3-BMI1R4GMX3 469 aa8.29□□□□□ -1.08
CCDC58-201ENST00000291458 FAM183AA6NL82 134 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 RIIAD1A6NNX1 92 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 H0YL77 283 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 ACOT8O14734 319 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 PHF1O43189 567 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-201ENST00000291458 ZNF205O95201 554 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 LCATP04180 440 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 SLC2A1P11166 492 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 SELEP16581 610 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 ANOS1P23352 680 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 TNFSF4P23510 183 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 CRYBB2P43320 205 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 CBX1P83916 185 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 COX10Q12887 443 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 TRAP1Q12931 704 aaKnown RBP8.28□□□□□ -1.08
CCDC58-201ENST00000291458 KCNMB1Q16558 191 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 FAM209AQ5JX71 171 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 SHQ1Q6PI26 577 aaKnown RBP8.28□□□□□ -1.08
CCDC58-201ENST00000291458 NAA40Q86UY6 237 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 ZBTB46Q86UZ6 589 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 LINC00471Q8N535 108 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 OR2T33Q8NG76 320 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 OR2T4Q8NH00 348 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 DVL3Q92997 716 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-201ENST00000291458 APOBEC3DQ96AK3 386 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-201ENST00000291458 OR2V2Q96R30 315 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 COQ7Q99807 217 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 COPS4Q9BT78 406 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 CYSLTR2Q9NS75 346 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 CENPMQ9NSP4 180 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 HIF1ANQ9NWT6 349 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 NKIRAS2Q9NYR9 191 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 KIF17Q9P2E2 1029 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 TMEFF2Q9UIK5 374 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-201ENST00000291458 ARHGAP32A7KAX9 2087 aa8.28□□□□□ -1.08
CCDC58-201ENST00000291458 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
CCDC58-201ENST00000291458 C5orf63A6NC05 138 aa8.27□□□□□ -1.09
CCDC58-201ENST00000291458 B4DSR2 109 aa8.27□□□□□ -1.09
CCDC58-201ENST00000291458 F5H5P2 479 aa8.27□□□□□ -1.09
CCDC58-201ENST00000291458 H3BSA7 217 aa8.27□□□□□ -1.09
CCDC58-201ENST00000291458 M0R135 149 aa8.27□□□□□ -1.09
CCDC58-201ENST00000291458 TBX1O43435 398 aa8.27□□□□□ -1.09
CCDC58-201ENST00000291458 IDH3BO43837 385 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms