RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 C20orf196Q8IYI0 205 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 OR5D18Q8NGL1 313 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC39A7Q92504 469 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SPTSSAQ969W0 71 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 TP63Q9H3D4 680 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 B3GNT2Q9NY97 397 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 GNG12Q9UBI6 72 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 RHBDD3Q9Y3P4 386 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF814B7Z6K7 855 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 SYT7O43581 403 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 OR7C1O76099 320 aaPredicted RBP7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 CRYAAP02489 173 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 IFNGR1P15260 489 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 TPTEP56180 551 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 P2RY8Q86VZ1 359 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 OR52N5Q8NH56 324 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 OR2M2Q96R28 347 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 NKX3-1Q99801 234 aaPredicted RBP7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 INPP5EQ9NRR6 644 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 KCNG2Q9UJ96 466 aa7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 ING1Q9UK53 422 aaPredicted RBP7.46□□□□□ -1.21
PTPDC1-201ENST00000288976 RPL36A-HNRNPH2H7BZ11 118 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 H7C2Y5 167 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 TNFSF12O43508 249 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC43A1O75387 559 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 YIF1AO95070 293 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 RAB40BQ12829 278 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM69Q5SWH9 247 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 OR7E24Q6IFN5 339 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 ZIC4Q8N9L1 334 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 BOD1Q96IK1 185 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 CNTNAP3BQ96NU0 1288 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 CNTNAP3Q9BZ76 1288 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM14AQ9Y6G1 99 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC22A23A1A5C7 686 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 FABP12A6NFH5 140 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 TSPAN4O14817 238 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 TRMUO75648 421 aaKnown RBP7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 YES1P07947 543 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 SFTPBP07988 381 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 TIMP3P35625 211 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 RIPPLY2Q5TAB7 128 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 LAIR2Q6ISS4 152 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 HSD17B8Q92506 261 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 RASD2Q96D21 266 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 SNRNP40Q96DI7 357 aaKnown RBP7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 A3GALT2U3KPV4 340 aa7.46□□□□□ -1.22
PTPDC1-201ENST00000288976 GLCEO94923 617 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 APOC1P02654 83 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC2A1P11166 492 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CRHBPP24387 322 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 RAB35Q15286 201 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 KCNMB1Q16558 191 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 ST3GAL2Q16842 350 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM53Q6P2H8 277 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF782Q6ZMW2 699 aaPredicted RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 RRNAD1Q96FB5 475 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 URM1Q9BTM9 101 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 PSORS1C1Q9UIG5 152 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 NOP16Q9Y3C1 178 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 RPA2P15927 270 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CD36P16671 472 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 IL2RGP31785 369 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 BIDP55957 195 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 BLMHQ13867 455 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 HNF4GQ14541 408 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 B3GLCTQ6Y288 498 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 COQ8AQ8NI60 647 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CNIH3Q8TBE1 160 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 Q96M85 177 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 ATG5Q9H1Y0 275 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 SP140LQ9H930 580 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 FGF20Q9NP95 211 aaPredicted RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 HINT3Q9NQE9 182 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CFAP54Q96N23 3096 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 TRIM64CA6NLI5 447 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CDC14BO60729 498 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 HLA-DOBP13765 273 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 SPI1P17947 270 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CDKN2AP42771 156 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 EIF2B2P49770 351 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 GLO1Q04760 184 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 TSTQ16762 297 aaKnown RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CHRFAM7AQ494W8 412 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 GLT8D1Q68CQ7 371 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC25A47Q6Q0C1 308 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 MKXQ8IYA7 352 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 OR6K3Q8NGY3 331 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 TRIM63Q969Q1 353 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 TIMD4Q96H15 378 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 IGLV1-36A0A0B4J1U3 117 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 J3QRE1 110 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 XPNPEP2O43895 674 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 IL18BPO95998 194 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 AGTR1P30556 359 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 ACTC1P68032 377 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 ACTA1P68133 377 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms