RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SIRT4Q9Y6E7 314 aaPredicted RBP18.9■□□□□ 0.62
PDLIM3-203ENST00000284771 C5orf49A4QMS7 147 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 C5orf63A6NC05 138 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 MT-ND5P03915 603 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 DCTDP32321 178 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 NANOS3P60323 173 aaKnown RBP18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 GRB2P62993 217 aaKnown RBP18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 MFGE8Q08431 387 aaPredicted RBP18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 C1QTNF12Q5T7M4 302 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 EGFL6Q8IUX8 553 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 NDRG3Q9UGV2 375 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 M0R135 149 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 TACSTD2P09758 323 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 ACSM4P0C7M7 580 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 SLC2A1P11166 492 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF35P13682 527 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 IGFBP2P18065 325 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 CCNOP22674 350 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 HSD11B1P28845 292 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 SVOPQ8N4V2 548 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF799Q96GE5 643 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 FAM206AQ9NX38 181 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF319Q9P2F9 582 aa18.89■□□□□ 0.61
PDLIM3-203ENST00000284771 M0R1B8 84 aa18.88■□□□□ 0.61
PDLIM3-203ENST00000284771 INMTO95050 263 aa18.88■□□□□ 0.61
PDLIM3-203ENST00000284771 APLNRP35414 380 aa18.88■□□□□ 0.61
PDLIM3-203ENST00000284771 NEDD8Q15843 81 aa18.88■□□□□ 0.61
PDLIM3-203ENST00000284771 UBE2UQ5VVX9 321 aa18.88■□□□□ 0.61
PDLIM3-203ENST00000284771 BRD7Q9NPI1 651 aa18.88■□□□□ 0.61
PDLIM3-203ENST00000284771 TMEM269A0A1B0GVZ9 245 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 DPRXA6NFQ7 191 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 PAX7P23759 505 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 CALCRP30988 508 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 WNT5AP41221 380 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 CX3CR1P49238 355 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 GDI2P50395 445 aaKnown RBP18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 MMP16P51512 607 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF121P58317 390 aaPredicted RBP18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 C3orf36Q3SXR2 165 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 FAM220AQ7Z4H9 259 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF101Q8IZC7 436 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 PRSS35Q8N3Z0 413 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF283Q8N7M2 679 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 ZFP41Q8N8Y5 198 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 SPTSSAQ969W0 71 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 MRPL48Q96GC5 212 aaKnown RBP18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 DOK1Q99704 481 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 NIPAL2Q9H841 368 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 G6PC2Q9NQR9 355 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 FRRS1LQ9P0K9 344 aa18.87■□□□□ 0.61
PDLIM3-203ENST00000284771 NGFP01138 241 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 TFAP2AP05549 437 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 PSMA6P60900 246 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 NAAAQ02083 359 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 ACSM1Q08AH1 577 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 IL17RDQ8NFM7 739 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 DACH2Q96NX9 599 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 MYCBPQ99417 103 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 MGLLQ99685 303 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 CRIM1Q9NZV1 1036 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 ST6GALNAC2Q9UJ37 374 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 SLC22A13Q9Y226 551 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 R4GMQ9 66 aa18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 UTP20O75691 2785 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-203ENST00000284771 IGHV2OR16-5A0A0B4J2B6 119 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 SIAH2O43255 324 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 HSMCR30P0CW71 290 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 CD40P25942 277 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 SLC6A9P48067 706 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 TPTEP56180 551 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 SPOCK1Q08629 439 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 TBC1D28Q2M2D7 210 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 SNAI3Q3KNW1 292 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 DRAM2Q6UX65 266 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 COLCA1Q6ZS62 124 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 SSX8Q7RTT4 187 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 ACBD4Q8NC06 268 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 OR2G2Q8NGZ5 317 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 COG8Q96MW5 612 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 OPALINQ96PE5 141 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 MRPS26Q9BYN8 205 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 MOV10Q9HCE1 1003 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 N6AMT1Q9Y5N5 214 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 CLDN1O95832 211 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 KIR3DL2P43630 455 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 GBX2P52951 348 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 GP2P55259 537 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 WDR38Q5JTN6 314 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 FDX2Q6P4F2 183 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 CATSPERDQ86XM0 798 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 DMRTC2Q8IXT2 367 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 C4orf45Q96LM5 186 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 C1QTNF5Q9BXJ0 243 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 TRIM36Q9NQ86 728 aa18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 KLF2Q9Y5W3 355 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-203ENST00000284771 ROS1P08922 2347 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 PNMA8CA0A1B0GUJ8 204 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 OGG1O15527 345 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 CLPTM1O96005 669 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 TGM4P49221 684 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms