RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 N6AMT1Q9Y5N5 214 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 KNTC1P50748 2209 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 PHF3Q92576 2039 aaKnown RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 A0A1B0GVI7 797 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 OR5H15A6NDH6 313 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 INMT-MINDY4F8WBC2 141 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CYTIPO60759 359 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CELA3AP09093 270 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 TRAPPC2P0DI81 140 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 TRAPPC2BP0DI82 140 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 HTR2CP28335 458 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 GDNFP39905 211 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CX3CR1P49238 355 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 SOX8P57073 446 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 TAS2R20P59543 309 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 BTG1P62324 171 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 MRPS10P82664 201 aaKnown RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 SNTB2Q13425 540 aaKnown RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CCDC92Q53HC0 331 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 GLYATL3Q5SZD4 288 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 ATP1A1-AS1Q5TC04 95 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 DNM1P46Q6ZS02 220 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 LRRC18Q8N456 261 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 MDS2Q8NDY4 140 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 OR8B12Q8NGG6 310 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 OR6M1Q8NGM8 313 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 OR6F1Q8NGZ6 308 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CPT1CQ8TCG5 803 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CREB3L1Q96BA8 519 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 UPRTQ96BW1 309 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 FOXRED1Q96CU9 486 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 ADAT3Q96EY9 351 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF845Q96IR2 970 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 TTTY12Q9BZ98 90 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 AUNIPQ9H7T9 357 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 DIABLOQ9NR28 239 aa8.45□□□□□ -1.06
TRIM55-201ENST00000276573 CGGBP1Q9UFW8 167 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 LOC390937A0A1W2PQ73 354 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ARGFXA6NJG6 315 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 A6NL46 340 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 FAM166BA8MTA8 275 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 CTAG2O75638 210 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 SLC2A1P11166 492 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 MAGEA5P43359 124 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 LHX2P50458 406 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GALK2Q01415 458 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 PLGLB1Q02325 96 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 TATDN3Q17R31 274 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 RSPO1Q2MKA7 263 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ELFN2Q5R3F8 820 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF813Q6ZN06 617 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GALNTL5Q7Z4T8 443 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 BIVMQ86UB2 503 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM251Q8N6I4 163 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 PRSS33Q8NF86 280 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 OR1M1Q8NGA1 313 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 OR5D14Q8NGL3 314 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GCDHQ92947 438 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 FBXO17Q96EF6 278 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ST6GAL2Q96JF0 529 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 NKX3-1Q99801 234 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 CACNG6Q9BXT2 260 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 DPAGT1Q9H3H5 408 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 SLC5A6Q9Y289 635 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 KLF13Q9Y2Y9 288 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 RBMX2Q9Y388 322 aaKnown RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ALG5Q9Y673 324 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 KIAA1549Q9HCM3 1950 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 KLRC4-KLRK1H3BQV0 150 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ACOT7O00154 380 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 NME2P1O60361 137 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ECDO95905 644 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GSTT2BP0CG30 244 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 PTHLHP12272 177 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ARSBP15848 533 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 CCL1P22362 96 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 NME2P22392 152 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 BDKRB2P30411 391 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GNALP38405 381 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 CLDN18P56856 261 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 HYAL4Q2M3T9 481 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 FAM57BQ71RH2 274 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 NAA40Q86UY6 237 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GPR137CQ8N3F9 429 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 NKAIN3Q8N8D7 197 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 UBASH3BQ8TF42 649 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 SLC7A6Q92536 515 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 HAS2Q92819 552 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 KCNK15Q9H427 330 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 ASCL3Q9NQ33 180 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 GPR84Q9NQS5 396 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 MRPL15Q9P015 296 aaKnown RBP8.44□□□□□ -1.06
TRIM55-201ENST00000276573 KLK11Q9UBX7 282 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 RHBDD3Q9Y3P4 386 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 CFAP54Q96N23 3096 aa8.44□□□□□ -1.06
TRIM55-201ENST00000276573 WDFY3Q8IZQ1 3526 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 CIB4A0PJX0 185 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms