RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 METAP1DQ6UB28 335 aaPredicted RBP14.34□□□□□ -0.11
TPM1-201ENST00000267996 ZNF813Q6ZN06 617 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 ABHD17AQ96GS6 310 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 DIRAS2Q96HU8 199 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 SLC17A5Q9NRA2 495 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 PLEK2Q9NYT0 353 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 ZNF319Q9P2F9 582 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 TIMM10BQ9Y5J6 103 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 PTPRQQ9UMZ3 2332 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 AHRRA9YTQ3 701 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 DOK2O60496 412 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 FARS2O95363 451 aaKnown RBP14.33□□□□□ -0.11
TPM1-201ENST00000267996 IGLV3-1P01715 115 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 CRYABP02511 175 aaKnown RBP14.33□□□□□ -0.11
TPM1-201ENST00000267996 APOC1P02654 83 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 MMP7P09237 267 aaPredicted RBP14.33□□□□□ -0.11
TPM1-201ENST00000267996 CCL1P22362 96 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 OR3A2P47893 321 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 ZNF79Q15937 498 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 SLC16A14Q7RTX9 510 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 P4HA3Q7Z4N8 544 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 FGD2Q7Z6J4 655 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 ZNF100Q8IYN0 542 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 OR13C3Q8NGS6 347 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 FGFBP3Q8TAT2 258 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 CCDC32Q9BV29 185 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.11
TPM1-201ENST00000267996 UPB1Q9UBR1 384 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 MALT1Q9UDY8 824 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 ADAM30Q9UKF2 790 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 RTTNQ86VV8 2226 aa14.33□□□□□ -0.11
TPM1-201ENST00000267996 PAHP00439 452 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 ANOS1P23352 680 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 PTBP1P26599 531 aaKnown RBP eCLIP14.33□□□□□ -0.125e-7■■■□□ 15.6
TPM1-201ENST00000267996 UCNP55089 124 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 FOXG1P55316 489 aaPredicted RBP14.33□□□□□ -0.12
TPM1-201ENST00000267996 PSG4Q00888 419 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 GALK2Q01415 458 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 ZNF181Q2M3W8 571 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 CNIH2Q6PI25 160 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 ZNF433Q8N7K0 673 aaPredicted RBP14.33□□□□□ -0.12
TPM1-201ENST00000267996 OR1F12Q8NHA8 337 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 TRMT10AQ8TBZ6 339 aaKnown RBP14.33□□□□□ -0.12
TPM1-201ENST00000267996 SNRNP27Q8WVK2 155 aaKnown RBP14.33□□□□□ -0.12
TPM1-201ENST00000267996 WNT2BQ93097 391 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 SPTSSAQ969W0 71 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 OR2H1Q9GZK4 316 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 SRRQ9GZT4 340 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 WNT5BQ9H1J7 359 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 OCEL1Q9H607 264 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 CYSLTR2Q9NS75 346 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 DMXL2Q8TDJ6 3036 aa14.33□□□□□ -0.12
TPM1-201ENST00000267996 ARHGAP21Q5T5U3 1957 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 FABP12A6NFH5 140 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 M0R135 149 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ZNHIT1O43257 154 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 SYT7O43581 403 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 SLC2A1P11166 492 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ZNF12P17014 697 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ELK1P19419 428 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 TMPRSS3P57727 454 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ACSF3Q4G176 576 aaPredicted RBP14.32□□□□□ -0.12
TPM1-201ENST00000267996 FBXW9Q5XUX1 488 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ZNF774Q6NX45 483 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 XKRXQ6PP77 449 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 FAM57BQ71RH2 274 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 LRRC28Q86X40 367 aaPredicted RBP14.32□□□□□ -0.12
TPM1-201ENST00000267996 SNX29P2Q8IUI4 249 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 OR5M9Q8NGP3 310 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 OR5H6Q8NGV6 325 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 OR51E1Q8TCB6 317 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ZNF799Q96GE5 643 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 GPR137Q96N19 417 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 TRIB1Q96RU8 372 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 MRI1Q9BV20 369 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 PPP1R3EQ9H7J1 279 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 ZNF224Q9NZL3 707 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 PRSS50Q9UI38 385 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 SPATA2Q9UM82 520 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 TP53TG5Q9Y2B4 290 aa14.32□□□□□ -0.12
TPM1-201ENST00000267996 A0A0U1RQV5 110 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 A0A1B0GVI7 797 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 F5H5K5 113 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 TBX1O43435 398 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 LMX1BO60663 402 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 SLC34A2O95436 690 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 ANXA2P07355 339 aaKnown RBP14.31□□□□□ -0.12
TPM1-201ENST00000267996 DBHP09172 617 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 PATE4P0C8F1 98 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 SNRPBP14678 240 aaKnown RBP14.31□□□□□ -0.12
TPM1-201ENST00000267996 MPGP29372 298 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 FAPQ12884 760 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 RIN1Q13671 783 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 DRAM2Q6UX65 266 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 FAM131AQ6UXB0 335 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 Q6ZSR3 168 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 ABHD12BQ7Z5M8 362 aaPredicted RBP14.31□□□□□ -0.12
TPM1-201ENST00000267996 NAA40Q86UY6 237 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 SAMD12Q8N8I0 201 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms