RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ZNF85Q03923 595 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 SSBP1Q04837 148 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 GPR157Q5UAW9 335 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 LYG2Q86SG7 212 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC22A18ASQ8N1D0 253 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF561Q8N587 486 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 HIST1H2AAQ96QV6 131 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 TINAGL1Q9GZM7 467 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 CA10Q9NS85 328 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 FGF21Q9NSA1 209 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 C1orf123Q9NWV4 160 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 LRFN1Q9P244 771 aa10.43□□□□□ -0.74
CLSTN3-201ENST00000266546 P2RY10O00398 339 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 CTSVO60911 334 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 RD3LP0DJH9 198 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 AVPR2P30518 371 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 SDHAP31040 664 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 DAP3P51398 398 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 PWWP2BQ6NUJ5 590 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 OVCH2Q7RTZ1 564 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 FJX1Q86VR8 437 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 OR5L2Q8NGL0 311 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 FAM213BQ8TBF2 198 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 FGGYQ96C11 551 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 IGF2P01344 180 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF44P15621 663 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 RUNX2Q13950 521 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 SSX2Q16385 188 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 IGSF11Q5DX21 431 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 CDC14CA4D256 554 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 IDSB3KWA1 339 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF749O43361 778 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 DIRAS3O95661 229 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 FABP1P07148 127 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 ANKRD34CP0C6C1 535 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 PEBP1P30086 187 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 DHRS2Q13268 280 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 ETFDHQ16134 617 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 MEX3BQ6ZN04 569 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 HSD17B11Q8NBQ5 300 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC30A7Q8NEW0 376 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 KCNG3Q8TAE7 436 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 CCDC74AQ96AQ1 378 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 CLCC1Q96S66 551 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 RHOFQ9HBH0 211 aa10.42□□□□□ -0.74
CLSTN3-201ENST00000266546 A0A1W2PR77 199 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC17A2O00624 439 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 RRP8O43159 456 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 RSU1Q15404 277 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 PPP1R3BQ86XI6 285 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 C1orf210Q8IVY1 113 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 AGBL5Q8NDL9 886 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 NUDCD2Q8WVJ2 157 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF75AQ96N20 296 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 WDR77Q9BQA1 342 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF442Q9H7R0 627 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ING1Q9UK53 422 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC22A13Q9Y226 551 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 GBF1Q92538 1859 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SCN3AQ9NY46 2000 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 H3BML4 177 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 TOX3O15405 576 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 IFNA1P01562 189 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 IFNA10P01566 189 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 POU3F2P20265 443 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 BCKDHBP21953 392 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF93P35789 620 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 KIRREL2Q6UWL6 708 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SEZ6L2Q6UXD5 910 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 Q6ZRG5 221 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 UBE3DQ7Z6J8 389 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 CBLN2Q8IUK8 224 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 LINC00346Q8IVM7 164 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 STPG2Q8N412 459 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ARIH2OSQ8N7S6 290 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 CCDC71LQ8N9Z2 235 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 LPAR4Q99677 370 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 DEFB126Q9BYW3 111 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SPACA1Q9HBV2 294 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 PURGQ9UJV8 347 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 MRPS28Q9Y2Q9 187 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 A0A1B0GX78 115 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 TMEM218A2RU14 115 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 GLAP06280 429 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 EPHA8P29322 1005 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 NOVA1P51513 510 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC36A2Q495M3 483 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 OGFOD3Q6PK18 319 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 MED25Q71SY5 747 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 NICN1Q9BSH3 213 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 TMPRSS13Q9BYE2 586 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ENKD1Q9H0I2 346 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms