RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GVQW1Q8N7I0 195 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 GPX8Q8TED1 209 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 CCDC107Q8WV48 283 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 LMAN1LQ9HAT1 526 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 UBQLN4Q9NRR5 601 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 INPP5EQ9NRR6 644 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 KLK13Q9UKR3 277 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 KLHDC2Q9Y2U9 406 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 DOCK8Q8NF50 2099 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 FITM1A5D6W6 292 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 PPP1R2P9O14990 202 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SLC16A5O15375 505 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SMPD2O60906 423 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SLCO2B1O94956 709 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 TRGC1P0CF51 173 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 BMP7P18075 431 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 RPS27P42677 84 aaKnown RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 SPINT3P49223 89 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 IL13RA1P78552 427 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 NAAAQ02083 359 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ZNHIT3Q15649 155 aaPredicted RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 PLEKHS1Q5SXH7 462 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 LYPLAL1Q5VWZ2 237 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SLC35F2Q8IXU6 374 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 JAGN1Q8N5M9 183 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 OR52E2Q8NGJ4 325 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 OR14C36Q8NHC7 312 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SUN3Q8TAQ9 357 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 NPRL2Q8WTW4 380 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 OR5B2Q96R09 309 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 RARRES2Q99969 163 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SMIM3Q9BZL3 60 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ZNF576Q9H609 170 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 PRDM7Q9NQW5 492 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SCN3AQ9NY46 2000 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SLC2A8Q9NY64 477 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 MRPS18CQ9Y3D5 142 aaKnown RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 OR1A2Q9Y585 309 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 RFNGQ9Y644 331 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 COLEC10Q9Y6Z7 277 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 TDRD6O60522 2096 aaKnown RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 WDFY4Q6ZS81 3184 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 NPIPA5A0A0B4J1W7 369 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 C9J4A7 227 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ZNF587BE7ETH6 402 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 NPIPA7E9PJI5 369 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 AK1P00568 194 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ERCC1P07992 297 aaPredicted RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 MMP7P09237 267 aaPredicted RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 OR4A8P0C604 315 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 NPIPA8P0DM63 369 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 TLX1P31314 330 aaPredicted RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 MAS1LP35410 378 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 FRKP42685 505 aaPredicted RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 PLAURQ03405 335 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 PDGFRLQ15198 375 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ELOBQ15370 118 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 GUK1Q16774 197 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 OR2T2Q6IF00 324 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ASB13Q8WXK3 278 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 EDAQ92838 391 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 LRFN5Q96NI6 719 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 CAMK1GQ96NX5 476 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 TNFRSF13CQ96RJ3 184 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SLC5A7Q9GZV3 580 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 BCL2L10Q9HD36 194 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SLC13A4Q9UKG4 626 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 SIGLEC7Q9Y286 467 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 RCL1Q9Y2P8 373 aaKnown RBP7.88□□□□□ -1.15
VAPB-201ENST00000265619 KCNIP3Q9Y2W7 256 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 ZNF281Q9Y2X9 895 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 FLVCR1Q9Y5Y0 555 aa7.88□□□□□ -1.15
VAPB-201ENST00000265619 WIPF3A6NGB9 483 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ERAL1O75616 437 aaKnown RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 AIFM1O95831 613 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 HIST1H1CP16403 213 aaKnown RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 KLK2P20151 261 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SNCAP37840 140 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 TDGF1P3P51864 188 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 NCBP2P52298 156 aaKnown RBP eCLIP7.87□□□□□ -1.15
VAPB-201ENST00000265619 ZNF136P52737 540 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ISXQ2M1V0 245 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 C14orf28Q4W4Y0 310 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 NKAIN3Q8N8D7 197 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 OR52L1Q8NGH7 329 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 ARRDC3Q96B67 414 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SAT2Q96F10 170 aaPredicted RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 CD180Q99467 661 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 EIF5A2Q9GZV4 153 aaKnown RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 TWSG1Q9GZX9 223 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 SLC25A31Q9H0C2 315 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 TAF9BQ9HBM6 251 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 NEUROD4Q9HD90 331 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 PADI1Q9ULC6 663 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 STARD10Q9Y365 291 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 PCYT1BQ9Y5K3 369 aaPredicted RBP7.87□□□□□ -1.15
VAPB-201ENST00000265619 IGLON5A6NGN9 336 aa7.87□□□□□ -1.15
VAPB-201ENST00000265619 GEMIN2O14893 280 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms