RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 OR8G5Q8NG78 346 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 FAHD2AQ96GK7 314 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 CLPTM1LQ96KA5 538 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 LRGUKQ96M69 825 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 TSSK6Q9BXA6 273 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 C1QTNF5Q9BXJ0 243 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 DCAF16Q9NXF7 216 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 SAMHD1Q9Y3Z3 626 aaKnown RBP13.59□□□□□ -0.23
USE1-201ENST00000263897 NPTNQ9Y639 398 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 F5H5K5 113 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 ACSM4P0C7M7 580 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 RAP2AP10114 183 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 ZNF823P16415 610 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 TRAP1Q12931 704 aaKnown RBP13.58□□□□□ -0.24
USE1-201ENST00000263897 SLC27A4Q6P1M0 643 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 NAA40Q86UY6 237 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 OR5AS1Q8N127 324 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 SLC37A3Q8NCC5 494 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 PROKR2Q8NFJ6 384 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 OR13G1Q8NGZ3 307 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 ITLN1Q8WWA0 313 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 ZNRF4Q8WWF5 429 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 MAP6Q96JE9 813 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 ZNF582Q96NG8 517 aaPredicted RBP13.58□□□□□ -0.24
USE1-201ENST00000263897 ATF6BQ99941 703 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 GAL3ST1Q99999 423 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 THTPAQ9BU02 230 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
USE1-201ENST00000263897 G6PC2Q9NQR9 355 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 TMEM106BQ9NUM4 274 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 TBC1D23Q9NUY8 699 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 FAM53CQ9NYF3 392 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 BAIAP2Q9UQB8 552 aa13.58□□□□□ -0.24
USE1-201ENST00000263897 ISPDA4D126 451 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 SBK2P0C263 348 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
USE1-201ENST00000263897 GK3PQ14409 553 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 KRTAP24-1Q3LI83 254 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 LIPNQ5VXI9 398 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 CD300LDQ6UXZ3 194 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 RFLNBQ8N5W9 214 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 ZNF283Q8N7M2 679 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 ATG16L2Q8NAA4 619 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 OR10S1Q8NGN2 331 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 OR4Q3Q8NH05 313 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 CCDC124Q96CT7 223 aaKnown RBP13.57□□□□□ -0.24
USE1-201ENST00000263897 OR2V2Q96R30 315 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
USE1-201ENST00000263897 CHID1Q9BWS9 393 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 NMNAT2Q9BZQ4 307 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 PPP1R3CQ9UQK1 317 aa13.57□□□□□ -0.24
USE1-201ENST00000263897 TVP23AA6NH52 213 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 IQCF6A8MYZ5 107 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 SOX14O95416 240 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 PNPP00491 289 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 CST1P01037 141 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 IGHV2-70P01814 119 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 LCATP04180 440 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 RBMXP38159 391 aaKnown RBP13.56□□□□□ -0.24
USE1-201ENST00000263897 TPTEP56180 551 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 SRSF2Q01130 221 aaKnown RBP13.56□□□□□ -0.24
USE1-201ENST00000263897 TRPM8Q7Z2W7 1104 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 LRRC28Q86X40 367 aaPredicted RBP13.56□□□□□ -0.24
USE1-201ENST00000263897 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 OR2T33Q8NG76 320 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 OR51L1Q8NGJ5 315 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 OR9Q1Q8NGQ5 310 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 GIPC3Q8TF64 312 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 CANT1Q8WVQ1 401 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 FEVQ99581 238 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 SLC30A2Q9BRI3 323 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 HCAR1Q9BXC0 346 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 WDR76Q9H967 626 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 UBAP1Q9NZ09 502 aa13.56□□□□□ -0.24
USE1-201ENST00000263897 AQP12BA6NM10 295 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 H0YL77 283 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 AVPP01185 164 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 SELEP16581 610 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 FMO3P31513 532 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 RPS27P42677 84 aaKnown RBP13.55□□□□□ -0.24
USE1-201ENST00000263897 SLC25A1P53007 311 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 MALLQ13021 153 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 CRMP1Q14194 572 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 GK2Q14410 553 aaPredicted RBP13.55□□□□□ -0.24
USE1-201ENST00000263897 PCK2Q16822 640 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 LYPD4Q6UWN0 246 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 C1orf229Q6ZS94 237 aaPredicted RBP13.55□□□□□ -0.24
USE1-201ENST00000263897 AQP12AQ8IXF9 295 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 ZNF511Q8NB15 262 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 OR10G2Q8NGC3 310 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 BCAS4Q8TDM0 211 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 SIGLEC11Q96RL6 698 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 NIPSNAP1Q9BPW8 284 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 METTL17Q9H7H0 456 aaPredicted RBP13.55□□□□□ -0.24
USE1-201ENST00000263897 GCM1Q9NP62 436 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 TMEM100Q9NV29 134 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 ARMC1Q9NVT9 282 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms