RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 THNSL2Q86YJ6 484 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 OR10V1Q8NGI7 309 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 ACER3Q9NUN7 267 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 DIMT1Q9UNQ2 313 aaKnown RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 PMS2P1A4D2B8 440 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 OR13C7P0DN81 318 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 AADACP22760 399 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 ARR3P36575 388 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 OR10A3P58181 314 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 UBE2IP63279 158 aaKnown RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPG11-201ENST00000261866 B3GNTL1Q67FW5 361 aaPredicted RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 UNKLQ9H9P5 680 aaKnown RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SDHAP31040 664 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 OR10K2Q6IF99 312 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 DOK3Q7L591 496 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 LRRC56Q8IYG6 542 aaPredicted RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 DTWD2Q8NBA8 298 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 CPEB3Q8NE35 698 aaKnown RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 OR8U1Q8NH10 309 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SYT5O00445 386 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A6P0DMU7 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A5P0DMU8 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A7P0DMV0 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A8P0DMV1 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A9P0DMV2 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 GPR12P47775 334 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A2Q5DJT8 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 KCNIP4Q6PIL6 250 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 RHOUQ7L0Q8 258 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 TMEM102Q8N9M5 508 aaPredicted RBP11.02□□□□□ -0.64
SPG11-201ENST00000261866 WDR31Q8NA23 367 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 OXGR1Q96P68 337 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 GLULP15104 373 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 LIPAP38571 399 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 RPS23P62266 143 aaKnown RBP11.02□□□□□ -0.64
SPG11-201ENST00000261866 SPRED1Q7Z699 444 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 IKZF5Q9H5V7 419 aa11.02□□□□□ -0.64
SPG11-201ENST00000261866 SELEP16581 610 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 MRPS10P82664 201 aaKnown RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 SYT14P1Q58G82 188 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 RGS7BPQ6MZT1 257 aaPredicted RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 LYZL6O75951 148 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 CRYBA1P05813 215 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 IAPPP10997 89 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 CEACAM16Q2WEN9 425 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 WDR5BQ86VZ2 330 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 OR1M1Q8NGA1 313 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 KTI12Q96EK9 354 aaPredicted RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 ISG20L2Q9H9L3 353 aaKnown RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 ZNF391Q9UJN7 358 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 NDRG4Q9ULP0 352 aaKnown RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 GPRIN2O60269 458 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 ADIRFQ15847 76 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 CNRIP1Q96F85 164 aaPredicted RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 ARL2-SNX15V9GYD0 113 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 TJP1Q07157 1748 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 DEFB108AA8MXU0 73 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 B3GALNT1O75752 331 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 RGS11O94810 467 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 BTN1A1Q13410 526 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 XKR7Q5GH72 579 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 CATSPERDQ86XM0 798 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 CELF2-AS1Q8N7Q2 184 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 ZNF2Q9BSG1 426 aaPredicted RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 RD3LP0DJH9 198 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 ALOX5APP20292 161 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 IAH1Q2TAA2 248 aaPredicted RBP11.02□□□□□ -0.65
SPG11-201ENST00000261866 THEM4Q5T1C6 240 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 OR2V1Q8NHB1 315 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 WNT16Q9UBV4 365 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 RAB22AQ9UL26 194 aa11.02□□□□□ -0.65
SPG11-201ENST00000261866 NFYAP23511 347 aaPredicted RBP11.01□□□□□ -0.65
SPG11-201ENST00000261866 ZNF121P58317 390 aaPredicted RBP11.01□□□□□ -0.65
SPG11-201ENST00000261866 IHHQ14623 411 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
SPG11-201ENST00000261866 OR10AD1Q8NGE0 317 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 KIRREL1Q96J84 757 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 VN1R1Q9GZP7 353 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 PRAF2O60831 178 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 FOXL2P58012 376 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 ZNF816Q0VGE8 651 aaPredicted RBP11.01□□□□□ -0.65
SPG11-201ENST00000261866 DUSP8Q13202 625 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 TAF9Q16594 264 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 NAA40Q86UY6 237 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 OPALINQ96PE5 141 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 PBOV1Q9GZY1 135 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 FRG2CA6NGY1 282 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 PPIHO43447 177 aaKnown RBP11.01□□□□□ -0.65
SPG11-201ENST00000261866 RAB13P51153 203 aa11.01□□□□□ -0.65
SPG11-201ENST00000261866 ZNF626Q68DY1 528 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms