RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 GP1BAP07359 652 aa17.28■□□□□ 0.36
SCARB1-201ENST00000261693 SHHQ15465 462 aa17.28■□□□□ 0.36
SCARB1-201ENST00000261693 ELAVL1Q15717 326 aaKnown RBP17.28■□□□□ 0.36
SCARB1-201ENST00000261693 C1orf100Q5SVJ3 147 aa17.28■□□□□ 0.36
SCARB1-201ENST00000261693 DNTTIP1Q9H147 329 aa17.28■□□□□ 0.36
SCARB1-201ENST00000261693 GAREM1Q9H706 876 aa17.28■□□□□ 0.36
SCARB1-201ENST00000261693 RHBDD3Q9Y3P4 386 aa17.28■□□□□ 0.36
SCARB1-201ENST00000261693 RTTNQ86VV8 2226 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 TMEM200CA6NKL6 621 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 ERCC1P07992 297 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-201ENST00000261693 CD37P11049 281 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 SHISA6Q6ZSJ9 500 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 OR1S2Q8NGQ3 325 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 THAP6Q8TBB0 222 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 MARC2Q969Z3 335 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 ARL5BQ96KC2 179 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 PHB2Q99623 299 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 NKX6-2Q9C056 277 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-201ENST00000261693 ASF1BQ9NVP2 202 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 PCDHB10Q9UN67 800 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 MMACHCQ9Y4U1 282 aa17.27■□□□□ 0.36
SCARB1-201ENST00000261693 CPED1A4D0V7 1026 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 SULT2B1O00204 365 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 H2BFMP0C1H6 154 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 FASLGP48023 281 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 SRSF4Q08170 494 aaKnown RBP17.27■□□□□ 0.35
SCARB1-201ENST00000261693 OR7A5Q15622 319 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 PAN3Q58A45 887 aaKnown RBP17.27■□□□□ 0.35
SCARB1-201ENST00000261693 GRINAQ7Z429 371 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 INO80EQ8NBZ0 244 aaPredicted RBP17.27■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF248Q8NDW4 579 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 SPACA5Q96QH8 159 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 FOXQ1Q9C009 403 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 PCDHB16Q9NRJ7 776 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 RAB22AQ9UL26 194 aa17.27■□□□□ 0.35
SCARB1-201ENST00000261693 MED12Q93074 2177 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 CNTRLQ7Z7A1 2325 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 FER1L5A0AVI2 2057 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 A0A0A6YYH2 397 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 LOC390937A0A1W2PQ73 354 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 A6NJ64 397 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 MS4A18H0YCH9 400 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 WDPCPO95876 746 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 PMP2P02689 132 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 DEFB133Q30KQ1 61 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 MS4A18Q3C1V0 323 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 C1orf189Q5VU69 101 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF813Q6ZN06 617 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 RNF144BQ7Z419 303 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 LYPD6Q86Y78 171 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 CLRN3Q8NCR9 226 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 MITD1Q8WV92 249 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 WNT2BQ93097 391 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 ADAT3Q96EY9 351 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-201ENST00000261693 CYYR1Q96J86 154 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 GPR27Q9NS67 375 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 A0A1W2PQD3 144 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 C5orf51A6NDU8 294 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 TLCD2A6NGC4 264 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 NPIPA5E9PKD4 350 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 NUDT21O43809 227 aaKnown RBP17.26■□□□□ 0.35
SCARB1-201ENST00000261693 ISG15P05161 165 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 BDKRB2P30411 391 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 CCR5P51681 352 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF704Q6ZNC4 412 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-201ENST00000261693 SELENOIQ9C0D9 397 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 FN3KRPQ9HA64 309 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 NPIPA1Q9UND3 350 aa17.26■□□□□ 0.35
SCARB1-201ENST00000261693 A0A1W2PPC4 97 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 POU3F1Q03052 451 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-201ENST00000261693 PDSS1Q5T2R2 415 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 NKAIN3Q8N8D7 197 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 OR2I1PQ8NGU4 316 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 EMC6Q9BV81 110 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 FAM117AQ9C073 453 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 SLC39A1Q9NY26 324 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 COPS7AQ9UBW8 275 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 KCNK7Q9Y2U2 307 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 GPR31O00270 319 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 IGHMP01871 453 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 VSIG8P0DPA2 414 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 DCAF7P61962 342 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 INPP5JQ15735 1006 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-201ENST00000261693 TMEM244Q5VVB8 128 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 LANCL3Q6ZV70 420 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 SLC29A4Q7RTT9 530 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 OR13C9Q8NGT0 318 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 DUSP15Q9H1R2 295 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-201ENST00000261693 SLC2A8Q9NY64 477 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF107Q9UII5 783 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-201ENST00000261693 MKL2Q9ULH7 1088 aa17.25■□□□□ 0.35
SCARB1-201ENST00000261693 IGHV3-20A0A0C4DH32 117 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 C10orf142B7Z368 130 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 FADS1O60427 444 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 PGAM2P15259 253 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 RAB6AP20340 208 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-201ENST00000261693 TMEM88Q6PEY1 159 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 TMPPEQ6ZT21 453 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 MARCH1Q8TCQ1 289 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms