RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SPACA3Q8IXA5 215 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 ENKURQ8TC29 256 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 CSAG2Q9Y5P2 127 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 SLC17A2O00624 439 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 GSTZ1O43708 216 aaPredicted RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 CTSSP25774 331 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 ID4P47928 161 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 ART1P52961 327 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 CLDN18P56856 261 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 ZNF57Q68EA5 555 aaPredicted RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 SYNPRQ8TBG9 265 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 HAS2Q92819 552 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 EEF1E1O43324 174 aaKnown RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 ZNF708P17019 499 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 GLT8D1Q68CQ7 371 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 ZFP62Q8NB50 900 aaPredicted RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 CHAC2Q8WUX2 184 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 TMEM45BQ96B21 275 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 S100A16Q96FQ6 103 aaKnown RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 SCMH1Q96GD3 660 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 ZNF845Q96IR2 970 aaPredicted RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 SLC6A15Q9H2J7 730 aa24.38■■□□□ 1.49
CCM2-201ENST00000258781 ZNF275Q9NSD4 429 aaPredicted RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 TNRC6AQ8NDV7 1962 aaKnown RBP24.38■■□□□ 1.49
CCM2-201ENST00000258781 DOK2O60496 412 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 ADRB1P08588 477 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 ARG2P78540 354 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 RAB11BQ15907 218 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 FAM27BQ5VT28 67 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 FAM166AQ6J272 317 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 MEIOBQ8N635 442 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 ZNF775Q96BV0 537 aaPredicted RBP24.37■■□□□ 1.49
CCM2-201ENST00000258781 HAVCR1Q96D42 359 aa24.37■■□□□ 1.49
CCM2-201ENST00000258781 IGKV3D-15A0A087WSY6 115 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 SYT7O43581 403 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 LANCL1O43813 399 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 CEACAM4O75871 244 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 TPPPO94811 219 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 NTF4P34130 210 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 EIF2S3P41091 472 aaKnown RBP24.36■■□□□ 1.49
CCM2-201ENST00000258781 KIR2DL3P43628 341 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 CX3CR1P49238 355 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 PRKXP51817 358 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 BCL2A1Q16548 175 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 RIPPLY2Q5TAB7 128 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 GPR137CQ8N3F9 429 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 CPT1CQ8TCG5 803 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 YIPF5Q969M3 257 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 MRPS7Q9Y2R9 242 aaKnown RBP24.36■■□□□ 1.49
CCM2-201ENST00000258781 CACNA1AO00555 2505 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 A0A1B0GVI7 797 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 SULT1B1O43704 296 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 MNDAP41218 407 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 ZNF121P58317 390 aaPredicted RBP24.36■■□□□ 1.49
CCM2-201ENST00000258781 PPIAP62937 165 aaKnown RBP24.36■■□□□ 1.49
CCM2-201ENST00000258781 LUZP2Q86TE4 346 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 DUSP18Q8NEJ0 188 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 ZFP3Q96NJ6 502 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 PAQR5Q9NXK6 330 aaPredicted RBP24.36■■□□□ 1.49
CCM2-201ENST00000258781 DKK4Q9UBT3 224 aa24.36■■□□□ 1.49
CCM2-201ENST00000258781 ATMQ13315 3056 aa24.35■■□□□ 1.49
CCM2-201ENST00000258781 ITGA5P08648 1049 aa24.35■■□□□ 1.49
CCM2-201ENST00000258781 IGFL2Q6UWQ7 119 aa24.35■■□□□ 1.49
CCM2-201ENST00000258781 NKAIN3Q8N8D7 197 aa24.35■■□□□ 1.49
CCM2-201ENST00000258781 SMIM4Q8WVI0 70 aa24.35■■□□□ 1.49
CCM2-201ENST00000258781 ACKR4Q9NPB9 350 aa24.35■■□□□ 1.49
CCM2-201ENST00000258781 BOLA2-SMG1P6H3BVE0 249 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 ZNF283Q8N7M2 679 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 OR8B12Q8NGG6 310 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 ABHD3Q8WU67 409 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 A0A1B0GTI1 187 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 LMX1BO60663 402 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 FAM157BP0CG42 384 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 RANBP1P43487 201 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 DGCR2P98153 550 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 ZNF766Q5HY98 468 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 UBE2J2Q8N2K1 259 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 FAM109AQ8N4B1 249 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 DRAXINQ8NBI3 349 aaPredicted RBP24.34■■□□□ 1.49
CCM2-201ENST00000258781 TMEM178AQ8NBL3 297 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 PLPP7Q8NBV4 271 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 C15orf40Q8WUR7 153 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 ZNF837Q96EG3 531 aaPredicted RBP24.34■■□□□ 1.49
CCM2-201ENST00000258781 MMP28Q9H239 520 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 CRLF2Q9HC73 371 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 NPAP1Q9NZP6 1156 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 BSNQ9UPA5 3926 aa24.34■■□□□ 1.49
CCM2-201ENST00000258781 SYNGR4O95473 234 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 TNFSF10P50591 281 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 SERPINA12Q8IW75 414 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 IZUMO1Q8IYV9 350 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 LRRC18Q8N456 261 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 OR6M1Q8NGM8 313 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 OR51E1Q8TCB6 317 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 FGGYQ96C11 551 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 FAM122AQ96E09 287 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 SLC17A5Q9NRA2 495 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 TMEM38BQ9NVV0 291 aa24.33■■□□□ 1.49
CCM2-201ENST00000258781 LOC100289279A0A1B0GTE1 492 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 FAM240BA0A1B0GVZ2 78 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms