RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FGF21Q9NSA1 209 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF226Q9NYT6 803 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 TAS2R16Q9NYV7 291 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 VAX2Q9UIW0 290 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 CRLS1Q9UJA2 301 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 BTRCQ9Y297 605 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 SPAARA0A1B0GVQ0 90 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 A0A1W2PRS3 328 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 NPIPB15A6NHN6 443 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 FAM157AC9JC47 383 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 CREBL2O60519 120 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 EDNRBP24530 442 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 GDF1P27539 372 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 RGRP47804 291 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 DUSP3P51452 185 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 LBX1P52954 281 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 PAFAH1B2P68402 229 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 PMPCAQ10713 525 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 PRTGQ2VWP7 1150 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF699Q32M78 642 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 DND1Q8IYX4 353 aaKnown RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 KCNRGQ8N5I3 272 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 METTL27Q8N6F8 245 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 OR4D9Q8NGE8 314 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 DNASE2BQ8WZ79 361 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 MUCL1Q96DR8 90 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 RTP4Q96DX8 246 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 SUSD3Q96L08 255 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 FDXACB1Q9BRP7 624 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 GINS3Q9BRX5 216 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 CDCA4Q9BXL8 241 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 STRADBQ9C0K7 418 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 NIF3L1Q9GZT8 377 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 LPAR5Q9H1C0 372 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 LYRM4Q9HD34 91 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 LYRM2Q9NU23 88 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 FKBP11Q9NYL4 201 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 MMP17Q9ULZ9 603 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 DOT1LQ8TEK3 1739 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 UNC119BA6NIH7 251 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 FAM159BA6NKW6 160 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 PPP5D1E7EU14 171 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 SOX1O00570 391 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 TNFRSF13BO14836 293 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 CEACAM4O75871 244 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 IGFBP4P22692 258 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 IMPA1P29218 277 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 AGTR1P30556 359 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 OR3A2P47893 321 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 BACE1P56817 501 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 RAB32Q13637 225 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 SLC36A2Q495M3 483 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 ACSM3Q53FZ2 586 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 ADCK2Q7Z695 626 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 BATF2Q8N1L9 274 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 OR5D16Q8NGK9 328 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 PTX4Q96A99 478 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 SARAFQ96BY9 339 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 OR4K3Q96R72 315 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 NPY6RQ99463 290 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 PBDC1Q9BVG4 233 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 QTRT1Q9BXR0 403 aaKnown RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 MRPS18AQ9NVS2 196 aaKnown RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF358Q9NW07 568 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 SERTAD3Q9UJW9 196 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 VPREB3Q9UKI3 123 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 TBX21Q9UL17 535 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 LAMTOR2Q9Y2Q5 125 aa6.95□□□□□ -1.3
GPNMB-201ENST00000258733 DDX60LQ5H9U9 1706 aaKnown RBP6.95□□□□□ -1.3
GPNMB-201ENST00000258733 C9JQL5 133 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 F5H5P2 479 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 OR1F1O43749 312 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SEMA4FO95754 770 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 AIFM1O95831 613 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 DBHP09172 617 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 OR5H8P0DN80 308 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 BCKDHAP12694 445 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 FPR1P21462 350 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 RPL22P35268 128 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SRSF1Q07955 248 aaKnown RBP eCLIP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 P2RY6Q15077 328 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 C9orf50Q5SZB4 431 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF567Q8N184 647 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 FER1L6-AS1Q8NA97 138 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SLC38A9Q8NBW4 561 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SLC30A7Q8NEW0 376 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SLC26A10Q8NG04 563 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SLC7A13Q8TCU3 470 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 WBP2Q969T9 261 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 LINC00615Q96LM1 132 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 KCTD7Q96MP8 289 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF649Q9BS31 505 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 FZD8Q9H461 694 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SLC17A5Q9NRA2 495 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 HS3ST3B1Q9Y662 390 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 NINQ8N4C6 2090 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 PRSS37A4D1T9 235 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MAN2B1O00754 1011 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms