RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ATF1P18846 271 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 NPR2P20594 1047 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 MSR1P21757 451 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 CCR9P51686 369 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 RAB25P57735 213 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 ENDOGQ14249 297 aaKnown RBP16.65■□□□□ 0.26
TRIM47-201ENST00000254816 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 CEP78Q5JTW2 689 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 WDYHV1Q96HA8 205 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 OR52A1Q9UKL2 312 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 CAMK2AQ9UQM7 478 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 NOSIPQ9Y314 301 aaKnown RBP16.65■□□□□ 0.26
TRIM47-201ENST00000254816 BOLA1Q9Y3E2 137 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 ARHGAP21Q5T5U3 1957 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 EEF1E1O43324 174 aaKnown RBP16.65■□□□□ 0.26
TRIM47-201ENST00000254816 PITPNBP48739 271 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF84P51523 738 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 DEGS2Q6QHC5 323 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 FOXL2NBQ6ZUU3 175 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 GPR137CQ8N3F9 429 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 DUSP18Q8NEJ0 188 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 GPR148Q8TDV2 347 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 TSEN15Q8WW01 171 aaKnown RBP16.65■□□□□ 0.26
TRIM47-201ENST00000254816 ABHD1Q96SE0 405 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 THAP7Q9BT49 309 aaPredicted RBP16.65■□□□□ 0.26
TRIM47-201ENST00000254816 CALHM2Q9HA72 323 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 PNRC2Q9NPJ4 139 aaKnown RBP16.65■□□□□ 0.26
TRIM47-201ENST00000254816 WASF3Q9UPY6 502 aa16.65■□□□□ 0.26
TRIM47-201ENST00000254816 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
TRIM47-201ENST00000254816 GPR171O14626 319 aa16.64■□□□□ 0.25
TRIM47-201ENST00000254816 MRPS15P82914 257 aaKnown RBP16.64■□□□□ 0.25
TRIM47-201ENST00000254816 TRIM63Q969Q1 353 aa16.64■□□□□ 0.25
TRIM47-201ENST00000254816 RFT1Q96AA3 541 aa16.64■□□□□ 0.25
TRIM47-201ENST00000254816 BOD1L1Q8NFC6 3051 aa16.64■□□□□ 0.25
TRIM47-201ENST00000254816 CENPXA8MT69 81 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 ZNF878C9JN71 531 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 TRAPPC2P0DI81 140 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 TRAPPC2BP0DI82 140 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 PRKXP51817 358 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 LSM6P62312 80 aaKnown RBP16.63■□□□□ 0.25
TRIM47-201ENST00000254816 GPR176Q14439 515 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 KLHL24Q6TFL4 600 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 CHMP1BQ7LBR1 199 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 TMEM106AQ96A25 262 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 GFI1Q99684 422 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 FAM206AQ9NX38 181 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 IGKV3D-15A0A087WSY6 115 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 PDGFAP04085 211 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 HSD11B1P28845 292 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 TAF13Q15543 124 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 TSPO2Q5TGU0 170 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 ZADH2Q8N4Q0 377 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 ZNF433Q8N7K0 673 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-201ENST00000254816 PHYHIPQ92561 330 aa16.63■□□□□ 0.25
TRIM47-201ENST00000254816 K7EM74 188 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 MRPL33O75394 65 aaKnown RBP16.62■□□□□ 0.25
TRIM47-201ENST00000254816 EPXP11678 715 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 ANOS1P23352 680 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 SRP9P49458 86 aaKnown RBP16.62■□□□□ 0.25
TRIM47-201ENST00000254816 CEACAM16Q2WEN9 425 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 TMEM45BQ96B21 275 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 PAQR5Q9NXK6 330 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-201ENST00000254816 MED12LQ86YW9 2145 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 TRAV8-7A0A075B6U6 113 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 NOTOA8MTQ0 251 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 P2RY10O00398 339 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 SLC2A1P11166 492 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 B4GALT1P15291 398 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 BCL2L15Q5TBC7 163 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 KRT74Q7RTS7 529 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 FBXO17Q96EF6 278 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 GPR35Q9HC97 309 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 PLSCR3Q9NRY6 295 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 SLC5A6Q9Y289 635 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 MRPS7Q9Y2R9 242 aaKnown RBP16.62■□□□□ 0.25
TRIM47-201ENST00000254816 RTTNQ86VV8 2226 aa16.62■□□□□ 0.25
TRIM47-201ENST00000254816 APC2O95996 2303 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 TRBV5-7A0A0A0MS05 114 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 TGM6O95932 706 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 CPN1P15169 458 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 MAPK3P27361 379 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-201ENST00000254816 HLA-DMAP28067 261 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 EIF2S3P41091 472 aaKnown RBP16.61■□□□□ 0.25
TRIM47-201ENST00000254816 MRPS34P82930 218 aaKnown RBP16.61■□□□□ 0.25
TRIM47-201ENST00000254816 GALK2Q01415 458 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 STAC2Q6ZMT1 411 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 ABCG5Q9H222 651 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 TCF7L1Q9HCS4 588 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 LMX1BO60663 402 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 MAS1P04201 325 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 MMP16P51512 607 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 ZNF169Q14929 603 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-201ENST00000254816 DNAAF1Q8NEP3 725 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 CPT1CQ8TCG5 803 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 RNF170Q96K19 258 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 ZFP3Q96NJ6 502 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 TAAR6Q96RI8 345 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 MARVELD1Q9BSK0 173 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 PBOV1Q9GZY1 135 aa16.61■□□□□ 0.25
TRIM47-201ENST00000254816 TMEM38BQ9NVV0 291 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms