RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SGCAQ16586 387 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 HYAL4Q2M3T9 481 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 SLC36A2Q495M3 483 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 TMEM244Q5VVB8 128 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 ABLIM2Q6H8Q1 611 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 KLHL24Q6TFL4 600 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 RHOUQ7L0Q8 258 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 PRSS45Q7RTY3 260 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 C20orf196Q8IYI0 205 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 TMEM178AQ8NBL3 297 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 OR13C3Q8NGS6 347 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 SYNPRQ8TBG9 265 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 NKX3-1Q99801 234 aaPredicted RBP20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 DEFB127Q9H1M4 99 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 STEAP1Q9UHE8 339 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 DHHO43323 396 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 CD2P06729 351 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 UBCP0CG48 685 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 CLDN18P56856 261 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 PSMA6P60900 246 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 ENDOGQ14249 297 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 OR51A2Q8NGJ7 313 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 SSUH2Q9Y2M2 353 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 TTLL8A6PVC2 850 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 CD3GP09693 182 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 INPP1P49441 399 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 SRP9P49458 86 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 LSM6P62312 80 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 RNASE12Q5GAN4 147 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 AGAP6Q5VW22 663 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 FAM166AQ6J272 317 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 BAIAP2L2Q6UXY1 529 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 PLPP7Q8NBV4 271 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 DUSP18Q8NEJ0 188 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 ENKURQ8TC29 256 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 CHAC2Q8WUX2 184 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 NELFAQ9H3P2 528 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 ETV7Q9Y603 341 aa20.57■□□□□ 0.88
SYNGR3-201ENST00000248121 CDK2AP1O14519 115 aa20.56■□□□□ 0.88
SYNGR3-201ENST00000248121 CD37P11049 281 aa20.56■□□□□ 0.88
SYNGR3-201ENST00000248121 MSR1P21757 451 aa20.56■□□□□ 0.88
SYNGR3-201ENST00000248121 GPR176Q14439 515 aa20.56■□□□□ 0.88
SYNGR3-201ENST00000248121 MZT2BQ6NZ67 158 aa20.56■□□□□ 0.88
SYNGR3-201ENST00000248121 HAVCR1Q96D42 359 aa20.56■□□□□ 0.88
SYNGR3-201ENST00000248121 BSNQ9UPA5 3926 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 A0A0B4J293 547 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 CTDSPLO15194 276 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 TMIGD3P0DMS9 266 aaPredicted RBP20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 PRKXP51817 358 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 PITPNAQ00169 270 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 MTFR2Q6P444 385 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 FAM109AQ8N4B1 249 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 INTS12Q96CB8 462 aaKnown RBP20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 RBM24Q9BX46 236 aaKnown RBP20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 NUFIP1Q9UHK0 495 aaKnown RBP20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 PRRC2CQ9Y520 2896 aaKnown RBP20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 ZNHIT1O43257 154 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 DDOSTP39656 456 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 PTH2RP49190 550 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 OR51D1Q8NGF3 324 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 GCDHQ92947 438 aaPredicted RBP20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 ULBP2Q9BZM5 246 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 AUNIPQ9H7T9 357 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 RNF121Q9H920 327 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 ZNF319Q9P2F9 582 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 NLKQ9UBE8 527 aa20.55■□□□□ 0.88
SYNGR3-201ENST00000248121 MEIOCA2RUB1 952 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 SLC17A2O00624 439 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 GSTZ1O43708 216 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 SLC2A1P11166 492 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 HSD11B1P28845 292 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 ART1P52961 327 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 SMIM4Q8WVI0 70 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 KCNK15Q9H427 330 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 NIPAL2Q9H841 368 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 ZNF275Q9NSD4 429 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 RCE1Q9Y256 329 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 A0A1B0GTI1 187 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 ZNF708P17019 499 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 CDK2P24941 298 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 BTCP35070 178 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 TPTEP56180 551 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 SCAND1P57086 179 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 ZNF121P58317 390 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 BIVMQ86UB2 503 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 RAB40AQ8WXH6 277 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 SLC25A28Q96A46 364 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 PNPLA2Q96AD5 504 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 SPRR3Q9UBC9 169 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 CKLFQ9UBR5 152 aa20.54■□□□□ 0.88
SYNGR3-201ENST00000248121 FAM240BA0A1B0GVZ2 78 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 EFNB2P52799 333 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 TAF13Q15543 124 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 HACD4Q5VWC8 232 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 LYPD6Q86Y78 171 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 LRRC18Q8N456 261 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 ABHD3Q8WU67 409 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 CPNE4Q96A23 557 aaPredicted RBP20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 UPRTQ96BW1 309 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 S100A16Q96FQ6 103 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms