RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 TAS2R4Q9NYW5 299 aa11.29□□□□□ -0.6
SNAI1-201ENST00000244050 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
SNAI1-201ENST00000244050 MGAT4AQ9UM21 535 aa11.29□□□□□ -0.6
SNAI1-201ENST00000244050 KNTC1P50748 2209 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 TMEM272A0A1B0GTI8 110 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 TMEM269A0A1B0GVZ9 245 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 SHISA8B8ZZ34 492 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 C21orf140B9A014 251 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 SULT1C2O00338 296 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
SNAI1-201ENST00000244050 ALX3O95076 343 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 ALDOBP05062 364 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 UBCP0CG48 685 aaKnown RBP11.28□□□□□ -0.6
SNAI1-201ENST00000244050 CPN1P15169 458 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 HTR2CP28335 458 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 EIF1P41567 113 aaKnown RBP11.28□□□□□ -0.6
SNAI1-201ENST00000244050 VEGFCP49767 419 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 GALK2Q01415 458 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 SNTA1Q13424 505 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 CAMK2DQ13557 499 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 LINC00303Q3SY05 128 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 C1orf100Q5SVJ3 147 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 TMEM81Q6P7N7 255 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 HDDC2Q7Z4H3 204 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 SPICQ8N5J4 248 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 OR6M1Q8NGM8 313 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 OR13C3Q8NGS6 347 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 SLC25A43Q8WUT9 341 aaPredicted RBP11.28□□□□□ -0.6
SNAI1-201ENST00000244050 C11orf40Q8WZ69 217 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 DACT3Q96B18 629 aaPredicted RBP11.28□□□□□ -0.6
SNAI1-201ENST00000244050 GPR87Q9BY21 358 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 CHCHD2Q9Y6H1 151 aaPredicted RBP11.28□□□□□ -0.6
SNAI1-201ENST00000244050 EML6Q6ZMW3 1958 aa11.28□□□□□ -0.6
SNAI1-201ENST00000244050 KALRNO60229 2985 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 TRAV18A0A075B6X5 111 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 SNRPGP15A8MWD9 76 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 LDLRAD4O15165 306 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 H2BFMP0C1H6 154 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 GABRA1P14867 456 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 LAP3P28838 519 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 PRSS3P35030 304 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 DNASE1L1P49184 302 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 CAPZA1P52907 286 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 MLF1P58340 268 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 ZP1P60852 638 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 SNRPD2P62316 118 aaKnown RBP11.27□□□□□ -0.6
SNAI1-201ENST00000244050 PRAMEF20Q5VT98 475 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 Q6ZTK2 550 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 LYPD6Q86Y78 171 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.27□□□□□ -0.6
SNAI1-201ENST00000244050 UEVLDQ8IX04 471 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 NKAIN3Q8N8D7 197 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 OR11H4Q8NGC9 324 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 PTX4Q96A99 478 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 FOXRED1Q96CU9 486 aaPredicted RBP11.27□□□□□ -0.6
SNAI1-201ENST00000244050 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.6
SNAI1-201ENST00000244050 FAM206AQ9NX38 181 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 P4HTMQ9NXG6 502 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 CYB5R1Q9UHQ9 305 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 FBXL2Q9UKC9 423 aa11.27□□□□□ -0.6
SNAI1-201ENST00000244050 HELZ2Q9BYK8 2649 aaKnown RBP11.27□□□□□ -0.61
SNAI1-201ENST00000244050 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 LOC102725191A0A1B0GVB3 256 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 ANKRD34BA5PLL1 514 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 A6NJ64 397 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 STMND1H3BQB6 276 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
SNAI1-201ENST00000244050 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
SNAI1-201ENST00000244050 PCGF3Q3KNV8 242 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 GLYATL3Q5SZD4 288 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 RHOUQ7L0Q8 258 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 WDSUB1Q8N9V3 476 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 OR10H5Q8NGA6 315 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 OR4K17Q8NGC6 315 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 OR6X1Q8NH79 312 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 GPX8Q8TED1 209 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 RADILQ96JH8 1075 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 OXGR1Q96P68 337 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 EMC6Q9BV81 110 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 C1orf198Q9H425 327 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 PTGES2Q9H7Z7 377 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 BEX1Q9HBH7 125 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 GPN1Q9HCN4 374 aaPredicted RBP11.27□□□□□ -0.61
SNAI1-201ENST00000244050 HPF1Q9NWY4 346 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 HDGFL3Q9Y3E1 203 aa11.27□□□□□ -0.61
SNAI1-201ENST00000244050 MRPS18BQ9Y676 258 aaKnown RBP11.27□□□□□ -0.61
SNAI1-201ENST00000244050 LOC101059948A0A1B0GTJ6 334 aa11.26□□□□□ -0.61
SNAI1-201ENST00000244050 TRAF3IP2O43734 574 aaPredicted RBP11.26□□□□□ -0.61
SNAI1-201ENST00000244050 KDM4BO94953 1096 aa11.26□□□□□ -0.61
SNAI1-201ENST00000244050 IGHG1P01857 330 aa11.26□□□□□ -0.61
SNAI1-201ENST00000244050 PGA4P0DJD7 388 aa11.26□□□□□ -0.61
SNAI1-201ENST00000244050 PGA3P0DJD8 388 aa11.26□□□□□ -0.61
SNAI1-201ENST00000244050 DNASE1P24855 282 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms