RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 BOKQ9UMX3 212 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 HSPB11Q9Y547 144 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CACNG2Q9Y698 323 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SLC22A23A1A5C7 686 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 IFITM5A6NNB3 132 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 PLPP3O14495 311 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 KDM4BO94953 1096 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 DHFRP00374 187 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CD2P06729 351 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CELA3AP09093 270 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 UCHL1P09936 223 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CNR1P21554 472 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 GDNFP39905 211 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 GUCA2AQ02747 115 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 MFGE8Q08431 387 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SGCBQ16585 318 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 KCTD18Q6PI47 426 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 KLHL24Q6TFL4 600 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SCAIQ8N9R8 606 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 OR5D18Q8NGL1 313 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CA5BP1Q8WTZ4 195 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 RGP1Q92546 391 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 TXNIPQ9H3M7 391 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 HAO2Q9NYQ3 351 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 DKKL1Q9UK85 242 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM14AQ9Y6G1 99 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CLEC18AA5D8T8 446 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 FAM90A27PA6NNH2 459 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 DPP4P27487 766 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 HSD11B1P28845 292 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CLDN17P56750 224 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 RPS11P62280 158 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ASAH1Q13510 395 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 TRAM1Q15629 374 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 PYHIN1Q6K0P9 492 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CLEC18BQ6UXF7 455 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 TPRA1Q86W33 373 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 UEVLDQ8IX04 471 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SYS1Q8N2H4 156 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ZFP62Q8NB50 900 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CLEC18CQ8NCF0 446 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 OR51A2Q8NGJ7 313 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF486Q96H40 463 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ARPC5LQ9BPX5 153 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CKLFQ9UBR5 152 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 B4GALT7Q9UBV7 327 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 TRAPPC4Q9Y296 219 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ADGRG4Q8IZF6 3080 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 FAM172BPA6NC97 362 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 PDCD5O14737 125 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 OGG1O15527 345 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 GSTT2P0CG29 244 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 GSTT2BP0CG30 244 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 ARSBP15848 533 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 NPR2P20594 1047 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 CDK2P24941 298 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 UQCRC1P31930 480 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 MNDAP41218 407 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 UBE2MP61081 183 aaKnown RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 RPS4XP62701 263 aaKnown RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 BDH1Q02338 343 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 SLC35D3Q5M8T2 416 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 GLYATL3Q5SZD4 288 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 SP5Q6BEB4 398 aaPredicted RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 DOLPP1Q86YN1 238 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 OR2AJ1Q8NGZ0 328 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 OR6F1Q8NGZ6 308 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 OTOSQ8NHW6 89 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 SETD6Q8TBK2 473 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 GPER1Q99527 375 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 PTDSS2Q9BVG9 487 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 SLC6A15Q9H2J7 730 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 DPAGT1Q9H3H5 408 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM138Q9NPI0 162 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 TAS2R4Q9NYW5 299 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 ASH2LQ9UBL3 628 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 MOKQ9UQ07 419 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 LIPGQ9Y5X9 500 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 A0A0B4J293 547 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 DCTDP32321 178 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 AGFG1P52594 562 aaKnown RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 EFNB2P52799 333 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 ART1P52961 327 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 FCN2Q15485 313 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 WDFY1Q8IWB7 410 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 HOXB13Q92826 284 aaPredicted RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 FGGYQ96C11 551 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 ZFP64Q9NPA5 681 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 MRPL22Q9NWU5 206 aaKnown RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 ING3Q9NXR8 418 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 LRP12Q9Y561 859 aa7.66□□□□□ -1.18
VPS4B-201ENST00000238497 TEP1Q99973 2627 aaKnown RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 ANKHD1Q8IWZ3 2542 aaKnown RBP7.66□□□□□ -1.18
VPS4B-201ENST00000238497 EML6Q6ZMW3 1958 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 TRGV5A0A0B4J1U4 118 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 AKR7A2O43488 359 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 EFNA2O43921 213 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 GMDSO60547 372 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ACSM1Q08AH1 577 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 PMPCAQ10713 525 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms