RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 INTS12Q96CB8 462 aaKnown RBP10.43□□□□□ -0.74
NOD1-201ENST00000222823 KCNJ15Q99712 375 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 NEURL2Q9BR09 285 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 TRPM6Q9BX84 2022 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 A0A087WUJ7 227 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 HSPB2A8KAH6 182 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 DHHO43323 396 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 CNR1P21554 472 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 BCKDHBP21953 392 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 DUSP2Q05923 314 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 HSPB2Q16082 182 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 FAM27D1Q5T7N8 215 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 OR10K2Q6IF99 312 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 ZNF547Q8IVP9 402 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 CMTM4Q8IZR5 234 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 CCDC74BQ96LY2 380 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 GSX2Q9BZM3 304 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 PLEKHF2Q9H8W4 249 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 B9D1Q9UPM9 204 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 HDGFL3Q9Y3E1 203 aa10.43□□□□□ -0.74
NOD1-201ENST00000222823 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
NOD1-201ENST00000222823 NYNRINQ9P2P1 1898 aaKnown RBP10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR6C65A6NJZ3 312 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 SHBQ15464 509 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 C2orf76Q3KRA6 126 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 STAC2Q6ZMT1 411 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 MFSD4AQ8N468 514 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 NUDT9Q9BW91 350 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 HEYLQ9NQ87 328 aaPredicted RBP10.42□□□□□ -0.74
NOD1-201ENST00000222823 SLC39A9Q9NUM3 307 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 SLCO1B1Q9Y6L6 691 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 CCSO14618 274 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 GREM1O60565 184 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 C1QBP02746 253 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 DRD3P35462 400 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 SOHLH1Q5JUK2 328 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 CCDC71Q8IV32 467 aaPredicted RBP10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR5AS1Q8N127 324 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 GABRG1Q8N1C3 465 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR10R2Q8NGX6 335 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR2A5Q96R48 311 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 JAM3Q9BX67 310 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 C19orf12Q9NSK7 152 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 A0A0B4J203 849 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 RPS10-NUDT3A0A1W2PQS6 291 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 RRP8O43159 456 aaKnown RBP10.42□□□□□ -0.74
NOD1-201ENST00000222823 SSX4O60224 188 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 RGS11O94810 467 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 LALBAP00709 142 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 MSL3P1P0C860 447 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
NOD1-201ENST00000222823 TGM4P49221 684 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 FOXF1Q12946 379 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR8B8Q15620 311 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 TAF9Q16594 264 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 BRICD5Q6PL45 260 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 DPPA2Q7Z7J5 298 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 FJX1Q86VR8 437 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR51A4Q8NGJ6 313 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR1N1Q8NGS0 311 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR51H1Q8NH63 302 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 OR4A16Q8NH70 328 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 GPR119Q8TDV5 335 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 APH1BQ8WW43 257 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 ZG16BQ96DA0 208 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 ARHGDIGQ99819 225 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 FAM234AQ9H0X4 552 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 PCED1AQ9H1Q7 454 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 POFUT1Q9H488 388 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 R4GMQ9 66 aa10.42□□□□□ -0.74
NOD1-201ENST00000222823 ST8SIA3O43173 380 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SUMO3P55854 103 aaPredicted RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 UBE2KP61086 200 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 TLE4Q04727 773 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 GPNMBQ14956 572 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 TFAP2EQ6VUC0 442 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 TMPRSS11FQ6ZWK6 438 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 NUDCD2Q8WVJ2 157 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 ORAI1Q96D31 301 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SPACA9Q96E40 222 aaPredicted RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 PATJQ8NI35 1801 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 CBR3O75828 277 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 CSF3P09919 207 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 TGM1P22735 817 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 PTAFRP25105 342 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 CLDN15P56746 228 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 PCBP3P57721 371 aaKnown RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 IL10RAQ13651 578 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 HLA-BQ31612 363 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 OR6K3Q8NGY3 331 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 GPATCH2Q9NW75 528 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SIGLEC7Q9Y286 467 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 PCM1Q15154 2024 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 A0A096LPE4 126 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 A0A1W2PPZ6 126 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 HS3ST1O14792 307 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms