RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 ZNF629Q9UEG4 869 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 SBK3P0C264 359 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 ELLP55199 621 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 SSBP1Q04837 148 aaKnown RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 STAC2Q6ZMT1 411 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 SPEM1Q8N4L4 309 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 APH1BQ8WW43 257 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 NTN4Q9HB63 628 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 MED9Q9NWA0 146 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 POMT2Q9UKY4 750 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 SLC17A4Q9Y2C5 497 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 NXPH3O95157 252 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 TOR2AQ5JU69 321 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 THNSL2Q86YJ6 484 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 FBXL6Q8N531 539 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 NT5CQ8TCD5 201 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 BCL7CQ8WUZ0 217 aaPredicted RBP12.3□□□□□ -0.44
SF3A1-201ENST00000215793 RDH5Q92781 318 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 S1PR3Q99500 378 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 UFSP2Q9NUQ7 469 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 CACFD1Q9UGQ2 172 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 OSGIN2Q9Y236 505 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 NWD2Q9ULI1 1742 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 MEIKINA0A087WXM9 373 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 LILRA5A6NI73 299 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 H7BYZ3 331 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 DHHO43323 396 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 OR13C7P0DN81 318 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 FZD2Q14332 565 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 TAF9Q16594 264 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 OR2G2Q8NGZ5 317 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 ASB13Q8WXK3 278 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 GINS3Q9BRX5 216 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 PBOV1Q9GZY1 135 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 ZNF331Q9NQX6 463 aaPredicted RBP12.3□□□□□ -0.44
SF3A1-201ENST00000215793 MYO7AQ13402 2215 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 A0A1B0GUH1 482 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 ZGLP1P0C6A0 271 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 DTYMKP23919 212 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 UBE2G1P62253 170 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 AGBL4Q5VU57 503 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 DEFB127Q9H1M4 99 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 LIN7CQ9NUP9 197 aaKnown RBP12.3□□□□□ -0.44
SF3A1-201ENST00000215793 PROCRQ9UNN8 238 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 GAB2Q9UQC2 676 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 E5RGE8 158 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 GPR12P47775 334 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 NDUFA6P56556 154 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 CDC20BQ86Y33 519 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 FAM185AQ8N0U4 392 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 KDF1Q8NAX2 398 aaPredicted RBP12.3□□□□□ -0.44
SF3A1-201ENST00000215793 SLC25A32Q9H2D1 315 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 AK3Q9UIJ7 227 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 NSG2Q9Y328 171 aa12.3□□□□□ -0.44
SF3A1-201ENST00000215793 FIGNL2A6NMB9 653 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CBR3O75828 277 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 OR2J2O76002 312 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 OR5H8P0DN80 308 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 TAS2R45P59539 299 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CDC20Q12834 499 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ADAM5Q6NVV9 412 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 DND1Q8IYX4 353 aaKnown RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 GPX8Q8TED1 209 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 YIPF6Q96EC8 236 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 GLRA1P23415 457 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 AGFG1P52594 562 aaKnown RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 BAK1Q16611 211 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 OR10P1Q8NGE3 313 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 NUDCD2Q8WVJ2 157 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 SUCNR1Q9BXA5 334 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 LAMP3Q9UQV4 416 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 SLC22A13Q9Y226 551 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 LMO7DNF2Z398 122 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 BHLHE40O14503 412 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CTSLP07711 333 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CBR1P16152 277 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 FCGR2CP31995 323 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 GPR3P46089 330 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 PPIAP62937 165 aaKnown RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 TOMM34Q15785 309 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 KIRREL2Q6UWL6 708 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CDH26Q8IXH8 852 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 MED30Q96HR3 178 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 CIB3Q96Q77 187 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-201ENST00000215793 PLA2G12AQ9BZM1 189 aa12.29□□□□□ -0.44
SF3A1-201ENST00000215793 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms