RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 STAC2Q6ZMT1 411 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 LINC00346Q8IVM7 164 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 THOC3Q96J01 351 aaKnown RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 RHOVQ96L33 236 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 LRIT1Q9P2V4 623 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 V9GYH0 126 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 SLC31A2O15432 143 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 XRCC2O43543 280 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 GJA4P35212 333 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 CATR1Q13166 79 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 DOC2BQ14184 412 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 B3GNTL1Q67FW5 361 aaPredicted RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 ALKAL1Q6UXT8 129 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 CCNL2Q96S94 520 aaPredicted RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 VN1R3Q9BXE9 311 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 PLA2G12AQ9BZM1 189 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 FLVCR1Q9Y5Y0 555 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 SLC6A1P30531 599 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 NPSR1Q6W5P4 371 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 GPR137Q96N19 417 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 GLIPR2Q9H4G4 154 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 SLC25A19Q9HC21 320 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 HCFC2Q9Y5Z7 792 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 WSB1Q9Y6I7 421 aa9.52□□□□□ -0.88
VCL-201ENST00000211998 MYO18AQ92614 2054 aaKnown RBP9.52□□□□□ -0.88
VCL-201ENST00000211998 NSG1A0A0A6YYJ2 146 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 TRBV11-1A0A0K0K1C0 115 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 IGHG1P01857 330 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 CCKARP32238 428 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 GALR1P47211 349 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 PPP1CBP62140 327 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 RBPJQ06330 500 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 CDK5R1Q15078 307 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 PKDCCQ504Y2 493 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 TM4SF18Q96CE8 201 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 CTSFQ9UBX1 484 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 RNF150Q9ULK6 438 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 ARRDC5A6NEK1 342 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 FGF9P31371 208 aaPredicted RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 IL2RGP31785 369 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 OR1D4P47884 311 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 ZNF628Q5EBL2 1059 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 ELFN2Q5R3F8 820 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 ZNF626Q68DY1 528 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 ANKRD16Q6P6B7 361 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 MISPQ8IVT2 679 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 OR2L13Q8N349 312 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 OLIG1Q8TAK6 271 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 AMDHD1Q96NU7 426 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 STARD5Q9NSY2 213 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 IGF2P01344 180 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 CD81P60033 236 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 FAM71E1Q6IPT2 247 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 PGBD5Q8N414 524 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 VN1R2Q8NFZ6 395 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 NUBPLQ8TB37 319 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 EMG1Q92979 244 aaKnown RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 NUDT22Q9BRQ3 303 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 CMC2Q9NRP2 79 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 SIRT5Q9NXA8 310 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 DNMT3BQ9UBC3 853 aaKnown RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 A0A1B0GV90 55 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 BCAT2O15382 392 aaPredicted RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 MPPED1O15442 326 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 HSBP1O75506 76 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 OR10J4P0C629 311 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 PTHLHP12272 177 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 PTGER4P35408 488 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 MRM1Q6IN84 353 aaKnown RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 PTOV1Q86YD1 416 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 SAT2Q96F10 170 aaPredicted RBP9.52□□□□□ -0.89
VCL-201ENST00000211998 ADOQ96SZ5 270 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 DNAJB11Q9UBS4 358 aa9.52□□□□□ -0.89
VCL-201ENST00000211998 AHDC1Q5TGY3 1603 aaPredicted RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 ZNF133P52736 654 aaPredicted RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 MVDP53602 400 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 MPPED2Q15777 294 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 PCK2Q16822 640 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 FAM78AQ5JUQ0 283 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 WDR88Q6ZMY6 472 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 TMEM229BQ8NBD8 167 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 ACTR3CQ9C0K3 210 aaPredicted RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 NTMQ9P121 344 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 A8MVM7 634 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 PRKRAO75569 313 aaKnown RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 CD14P08571 375 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 CD46P15529 392 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 FAM162BQ5T6X4 162 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 AGBL5Q8NDL9 886 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms