RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF845Q96IR2 970 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 ZFP3Q96NJ6 502 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 RNF121Q9H920 327 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 FAM166BA8MTA8 275 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 BOLA2-SMG1P6H3BVE0 249 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 IGLV3-1P01715 115 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 APOC1P02654 83 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 CST2P09228 141 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 SLC6A1P30531 599 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 CX3CR1P49238 355 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 DGCR2P98153 550 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 GPR176Q14439 515 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 CCDC92Q53HC0 331 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 ELFN2Q5R3F8 820 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 PLET1Q6UQ28 207 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 FAM109AQ8N4B1 249 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 OR8B12Q8NGG6 310 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 FAM3DQ96BQ1 224 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 LINC00470Q9BZP3 86 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 MMP28Q9H239 520 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 SLC6A15Q9H2J7 730 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 TMEM38BQ9NVV0 291 aa12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 MRPS7Q9Y2R9 242 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 RBMX2Q9Y388 322 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-201ENST00000023939 FAM240BA0A1B0GVZ2 78 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 NKX2-8O15522 239 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 TRAPPC2P0DI81 140 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 TRAPPC2BP0DI82 140 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 RFC3P40938 356 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 RANBP1P43487 201 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 PRKXP51817 358 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 DYRK1AQ13627 763 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 IGFL2Q6UWQ7 119 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 Q6ZSR3 168 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 LUZP2Q86TE4 346 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 VASH2Q86V25 355 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 TMEM178AQ8NBL3 297 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 PLPP7Q8NBV4 271 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 CCDC54Q8NEL0 328 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 PTX4Q96A99 478 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 FGGYQ96C11 551 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF837Q96EG3 531 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 MARVELD1Q9BSK0 173 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 CRLF2Q9HC73 371 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 RHBDD3Q9Y3P4 386 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 A0A0U1RQV5 110 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 MEIOCA2RUB1 952 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 XRCC3O43542 346 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 LMX1BO60663 402 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 SYNGR4O95473 234 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 CD3GP09693 182 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 CDK2P24941 298 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 HTR2CP28335 458 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 POU3F4P49335 361 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ARG2P78540 354 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ECH1Q13011 328 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 SLC10A1Q14973 349 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 RTP5Q14D33 572 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 C2orf76Q3KRA6 126 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 PLA1AQ53H76 456 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF766Q5HY98 468 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 DOK3Q7L591 496 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 CDH26Q8IXH8 852 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 TOMM5Q8N4H5 51 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF283Q8N7M2 679 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 OR51D1Q8NGF3 324 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 OR5D14Q8NGL3 314 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 OR1J2Q8NGS2 313 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 OR51E1Q8TCB6 317 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 ABHD3Q8WU67 409 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 FBXO17Q96EF6 278 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 EMC3Q9P0I2 261 aa12.59□□□□□ -0.39
RTFDC1-201ENST00000023939 MED13Q9UHV7 2174 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 OR6C65A6NJZ3 312 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 A6NL46 340 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 CENPXA8MT69 81 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 ACOT7O00154 380 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 LDLRAD4O15165 306 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 DOK2O60496 412 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 BDKRB2P30411 391 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 TNFSF10P50591 281 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 TAS2R20P59543 309 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 KLF9Q13886 244 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 RAB35Q15286 201 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 RSPO1Q2MKA7 263 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 KRTAP27-1Q3LI81 207 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 LINGO2Q7L985 606 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms