RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
UBR7-201ENST00000013070 COPS7AQ9UBW8 275 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 A0A1W2PP11 408 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 RNF222A6NCQ9 220 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 SERTAD2Q14140 314 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 EBPQ15125 230 aaKnown RBP11.56□□□□□ -0.56
UBR7-201ENST00000013070 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 ABHD12BQ7Z5M8 362 aaPredicted RBP11.56□□□□□ -0.56
UBR7-201ENST00000013070 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 PTPMT1Q8WUK0 201 aaPredicted RBP11.56□□□□□ -0.56
UBR7-201ENST00000013070 GPX7Q96SL4 187 aaPredicted RBP11.56□□□□□ -0.56
UBR7-201ENST00000013070 ZNF806P0C7X5 589 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 ABOP16442 354 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 HSD11B1P28845 292 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 MPPED2Q15777 294 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 BHLHE23Q8NDY6 225 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 ASB17Q8WXJ9 295 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 KLHDC7BQ96G42 594 aa11.56□□□□□ -0.56
UBR7-201ENST00000013070 PSMB6P28072 239 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 SLC37A1P57057 533 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 TLE3Q04726 772 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 FUT7Q11130 342 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 RNF144BQ7Z419 303 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 NUBPLQ8TB37 319 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 OR51E1Q8TCB6 317 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 ARL11Q969Q4 196 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 TLNRD1Q9H1K6 362 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 PIGMQ9H3S5 423 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 PRMT8Q9NR22 394 aaPredicted RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 ZNF701Q9NV72 531 aaPredicted RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 ZNF629Q9UEG4 869 aaPredicted RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 GDF2Q9UK05 429 aaPredicted RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 TMEM218A2RU14 115 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 MPTX1A8MV57 137 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 SULT1C2O00338 296 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 CRTAPO75718 401 aaPredicted RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 SNAPC5O75971 98 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 TPT1P13693 172 aaKnown RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 CCINQ13939 588 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 INPP5JQ15735 1006 aaPredicted RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 LDLRAD3Q86YD5 345 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 LINC00518Q8N0U6 118 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 MESP1Q9BRJ9 268 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 UTP23Q9BRU9 249 aaKnown RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 PRELID3BQ9Y3B1 194 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 TICRRQ7Z2Z1 1910 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 PHF3Q92576 2039 aaKnown RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 NSA2O95478 260 aaKnown RBP11.55□□□□□ -0.56
UBR7-201ENST00000013070 IL33O95760 270 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 ACTL6AO96019 429 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 ITGA3P26006 1051 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 TNFRSF4P43489 277 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 PPICP45877 212 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 KCNJ3P48549 501 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 HSD17B7P56937 341 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 DMWDQ09019 674 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 IKZF1Q13422 519 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 ISXQ2M1V0 245 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 CLEC9AQ6UXN8 241 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 SLC29A4Q7RTT9 530 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 STOML3Q8TAV4 291 aa11.55□□□□□ -0.56
UBR7-201ENST00000013070 MED19A0JLT2 244 aaPredicted RBP11.54□□□□□ -0.56
UBR7-201ENST00000013070 TNFRSF10CO14798 259 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 ZNF205O95201 554 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 CDAP32320 146 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 RABIFP47224 123 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 CLDN6P56747 220 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 MEF2DQ14814 521 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBR7-201ENST00000013070 EMC4Q5J8M3 183 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
UBR7-201ENST00000013070 GMEB2Q9UKD1 530 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 MEGF11A6BM72 1044 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 OR5K4A6NMS3 321 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 ZNF878C9JN71 531 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 WDPCPO95876 746 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 ZNF93P35789 620 aaPredicted RBP11.54□□□□□ -0.56
UBR7-201ENST00000013070 CHAF1BQ13112 559 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 PDZK1IP1Q13113 114 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 ZNF704Q6ZNC4 412 aaPredicted RBP11.54□□□□□ -0.56
UBR7-201ENST00000013070 ADAMTS18Q8TE60 1221 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 SOX7Q9BT81 388 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 CRB3Q9BUF7 120 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 C20orf24Q9BUV8 137 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 MED9Q9NWA0 146 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 KCNK7Q9Y2U2 307 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 ZNF175Q9Y473 711 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 FANCMQ8IYD8 2048 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 PCNX3Q9H6A9 2034 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 IGKV1D-43A0A0B4J1Z2 117 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 SIGLEC6O43699 453 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 AMY2BP19961 511 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 CRABP1P29762 137 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 SLC6A9P48067 706 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 NPBWR1P48145 328 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 CEBPGP53567 150 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 PTCRAQ6ISU1 281 aaPredicted RBP11.54□□□□□ -0.56
UBR7-201ENST00000013070 GLIPR1L1Q6UWM5 242 aa11.54□□□□□ -0.56
UBR7-201ENST00000013070 LANCL3Q6ZV70 420 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms