RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
TSPAN9-201ENST00000011898 LINC01555Q8NAE3 123 aa11.03□□□□□ -0.64
TSPAN9-201ENST00000011898 OR5L2Q8NGL0 311 aa11.03□□□□□ -0.64
TSPAN9-201ENST00000011898 PHYHIPQ92561 330 aa11.03□□□□□ -0.64
TSPAN9-201ENST00000011898 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
TSPAN9-201ENST00000011898 MIA3Q5JRA6 1907 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 FFAR1O14842 300 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 TRAPPC6AO75865 159 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 PTHLHP12272 177 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 TRHRP34981 398 aaPredicted RBP11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 CDK5Q00535 292 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 TLE4Q04727 773 aa11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 SENP5Q96HI0 755 aaPredicted RBP11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 FAM71F1Q96KD3 344 aaPredicted RBP11.02□□□□□ -0.64
TSPAN9-201ENST00000011898 FITM1A5D6W6 292 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 H7BYZ3 331 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 DNAJB6O75190 326 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 ACAA1P09110 424 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 ZNF43P17038 809 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SNCAP37840 140 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SNRPNP63162 240 aaKnown RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 HNF4GQ14541 408 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 TMEM244Q5VVB8 128 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 GLDNQ6ZMI3 551 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 FAM58AQ8N1B3 248 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 IL22RA1Q8N6P7 574 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 OR13H1Q8NG92 308 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 RFPL4AA6NLU0 287 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 RFPL4AL1F8VTS6 287 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 NRG2O14511 850 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 LILRB5O75023 590 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 PAPLNO95428 1278 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SLC2A1P11166 492 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 FGF9P31371 208 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 MLF1P58340 268 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 RUNX2Q13950 521 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 INSL4Q14641 139 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 IQCJQ1A5X6 159 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 RBMS3Q6XE24 437 aaKnown RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SULF2Q8IWU5 870 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 STPG2Q8N412 459 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 ABHD1Q96SE0 405 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 TEX101Q9BY14 249 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 BARHL1Q9BZE3 327 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 SIRT7Q9NRC8 400 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 ZNF275Q9NSD4 429 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 RHBDD3Q9Y3P4 386 aa11.02□□□□□ -0.65
TSPAN9-201ENST00000011898 DNAH12Q6ZR08 3092 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TMEM212A6NML5 194 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 LRP3O75074 770 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 ZNF217O75362 1048 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 OPN1LWP04000 364 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 CCNOP22674 350 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 SFTPDP35247 375 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 MRPS21P82921 87 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 ZP2Q05996 745 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 MLC1Q15049 377 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 ELAVL1Q15717 326 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 SLC25A35Q3KQZ1 300 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 AGBL4Q5VU57 503 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TOMM20LQ6UXN7 152 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 LRP11Q86VZ4 500 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 FGF14Q92915 247 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 WNT2BQ93097 391 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 RSPRY1Q96DX4 576 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 MIXL1Q9H2W2 232 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 PARD6AQ9NPB6 346 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 GPR55Q9Y2T6 319 aaPredicted RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 CUL9Q8IWT3 2517 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 SPTAN1Q13813 2472 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 COL4A4P53420 1690 aaPredicted RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 NPIPA2E9PIF3 369 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 NPIPA3F8WFD2 350 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TBX19O60806 448 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TESK1Q15569 626 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 MEP1BQ16820 701 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TRAPPC6BQ86SZ2 158 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 PNPLA2Q96AD5 504 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TCTN2Q96GX1 697 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 NDUFS6O75380 124 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 GLCEO94923 617 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 OR4E1P0C645 316 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 LTBRP36941 435 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 BDH1Q02338 343 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 MAML2Q8IZL2 1156 aaPredicted RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TMEM123Q8N131 208 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 SIRT6Q8N6T7 355 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 TMEM37Q8WXS4 190 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 SIRT3Q9NTG7 399 aaPredicted RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 PLEKHB1Q9UF11 243 aaPredicted RBP11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 SUSD2Q9UGT4 822 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 RNF215Q9Y6U7 377 aa11.01□□□□□ -0.65
TSPAN9-201ENST00000011898 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
TSPAN9-201ENST00000011898 C2CD4DB7Z1M9 353 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms