RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CLEC4CQ8WTT0 213 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 DCBLD2Q96PD2 775 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 KIR3DX1Q9H7L2 352 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NIT2Q9NQR4 276 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 U3KQ87 197 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF593O00488 134 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 KLF8O95600 359 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TBX18O95935 607 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 LIPAP38571 399 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR8B8Q15620 311 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CLEC12BQ2HXU8 276 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 LCN10Q6JVE6 187 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 DOLPP1Q86YN1 238 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR2A1Q8NGT9 310 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CCDC74BQ96LY2 380 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ACKR4Q9NPB9 350 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NOSIPQ9Y314 301 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CSNK1G3Q9Y6M4 447 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 IGKV6D-21A0A0A0MT36 114 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 TMEM218A2RU14 115 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 NRASP01111 189 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CLDN20P56880 219 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 OXA1LQ15070 435 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CDONQ4KMG0 1287 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 NHSL2Q5HYW2 709 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 SAMD13Q5VXD3 122 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 LYSMD4Q5XG99 296 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 NPEPL1Q8NDH3 523 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 HGDQ93099 445 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 WBP2Q969T9 261 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ADOQ96SZ5 270 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ZDHHC11Q9H8X9 412 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 SLC25A19Q9HC21 320 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 KLRG2A4D1S0 409 aaPredicted RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FZD9O00144 591 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 LRP3O75074 770 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 SCO1O75880 301 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 IQCF3P0C7M6 154 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 G6PCP35575 357 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CASP3P42574 277 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ARHGAP11BQ3KRB8 267 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 NCR3LG1Q68D85 454 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 OR7E24Q6IFN5 339 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 SPATC1Q76KD6 591 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 STPG2Q8N412 459 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 MORN4Q8NDC4 146 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 SLC24A4Q8NFF2 622 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 OCEL1Q9H607 264 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 HES4Q9HCC6 221 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 BCL2L10Q9HD36 194 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ZMAT5Q9UDW3 170 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FGF9P31371 208 aaPredicted RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 VAMP3Q15836 100 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 UBALD2Q8IYN6 164 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 Q8N9G6 341 aaPredicted RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 DDX31Q9H8H2 851 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 TRAPPC4Q9Y296 219 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FLVCR1Q9Y5Y0 555 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 AGRNO00468 2067 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF831Q5JPB2 1677 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 MEIS3P2A8K0S8 358 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 DBHP09172 617 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 MGST1P10620 155 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FZD2Q14332 565 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 DUSP5Q16690 384 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF836Q6ZNA1 936 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 BAP18Q8IXM2 172 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 BOLLQ8N9W6 283 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 VN1R2Q8NFZ6 395 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 OR4F5Q8NH21 305 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 PCNPQ8WW12 178 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 OR4F4Q96R69 305 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CDC42EP3Q9UKI2 254 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 USP3Q9Y6I4 520 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 MBLAC1A4D2B0 266 aaPredicted RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 TERTO14746 1132 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FABP7O15540 132 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 HSBP1O75506 76 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 SOD1P00441 154 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 LIPCP11150 499 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CEACAM3P40198 252 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FUT6P51993 359 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 HSF1Q00613 529 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 KIAA0141Q14154 515 aaPredicted RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 NPY5RQ15761 445 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 TRILQ7L0X0 811 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 FJX1Q86VR8 437 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ATOH8Q96SQ7 321 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CFAP20Q9Y6A4 193 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 PIP5KL1Q5T9C9 394 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 C18orf63Q68DL7 685 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 IFITM5A6NNB3 132 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 BET1O15155 118 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 BCL2L11O43521 198 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 ICMTO60725 284 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CA11O75493 328 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 PPP1R17O96001 155 aa5.56□□□□□ -1.52
VPS13D-201ENST00000011700 CRYABP02511 175 aaKnown RBP5.56□□□□□ -1.52
VPS13D-201ENST00000011700 OR8G1Q15617 311 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms