RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CDADC1Q9BWV3 514 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 JAM3Q9BX67 310 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 KCNN2Q9H2S1 579 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 INPP5EQ9NRR6 644 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 CHCHD3Q9NX63 227 aaKnown RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 JKAMPQ9P055 326 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 CYB5R1Q9UHQ9 305 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 LAMP5Q9UJQ1 280 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 EXOSC1Q9Y3B2 195 aaKnown RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 SNX5Q9Y5X3 404 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 LHFPL6Q9Y693 200 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 DAPL1A0PJW8 107 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 MAGEA13PA6NCF6 341 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 PRR32B1ATL7 298 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 PHYHO14832 338 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 MRPS14O60783 128 aaKnown RBP8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TMCC2O75069 709 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 WNT11O96014 354 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 CST2P09228 141 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 SMIM18P0DKX4 95 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 MAP2K4P45985 399 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 CAPZA2P47755 286 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 UBE2NP61088 152 aaKnown RBP8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TUBA1BP68363 451 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TUBA4AP68366 448 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF85Q03923 595 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 GABRA6Q16445 453 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TBRG1Q3YBR2 411 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 SFRP5Q5T4F7 317 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF322Q6U7Q0 402 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TUBA1AQ71U36 451 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 SSX6Q7RTT6 188 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 PRSS48Q7RTY5 328 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 DCXRQ7Z4W1 244 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 SKA3Q8IX90 412 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 C17orf78Q8N4C9 275 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TSPAN14Q8NG11 270 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 OR2AJ1Q8NGZ0 328 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 BCL2L2Q92843 193 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-228ENST00000641847 FBXO17Q96EF6 278 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 SIGLEC11Q96RL6 698 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 AMELYQ99218 206 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 ALG8Q9BVK2 526 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 UBTD1Q9HAC8 227 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 ERVK13-1Q9NX77 482 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 GALNT8Q9NY28 637 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 ELOVL5Q9NYP7 299 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 CLEC2DQ9UHP7 191 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 TMEM14AQ9Y6G1 99 aa8.18□□□□□ -1.1
PHGDH-228ENST00000641847 CHD3Q12873 2000 aaKnown RBP8.18□□□□□ -1.1
PHGDH-228ENST00000641847 A0A087WXM4 84 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ARPC4-TTLL3A0A0A6YYG9 625 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF503-AS2A6NEH8 195 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 OR5H1A6NKK0 313 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 PSMD9O00233 223 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 MYL12BO14950 172 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 RER1O15258 196 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 WIPF1O43516 503 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 UBL3O95164 117 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 HLA-HP01893 362 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 PATE4P0C8F1 98 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 LIMS3P0CW19 117 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 LIMS4P0CW20 117 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ATP6V1B1P15313 513 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF32P17041 273 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ALOX5APP20292 161 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 PSMB1P20618 241 aaKnown RBP8.17□□□□□ -1.1
PHGDH-228ENST00000641847 CCKARP32238 428 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 CD79BP40259 229 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ETV1P50549 477 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 PCBD1P61457 104 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 SCRN3Q0VDG4 424 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 IRF3Q14653 427 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 SLC36A2Q495M3 483 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 RNLSQ5VYX0 342 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 OR7E24Q6IFN5 339 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 TMEM154Q6P9G4 183 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 STAC2Q6ZMT1 411 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 CFAP77Q6ZQR2 320 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 SPATC1Q76KD6 591 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 FAM220AQ7Z4H9 259 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 LHFPL3Q86UP9 236 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 SPARTQ8N0X7 666 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 KLHL36Q8N4N3 616 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 SVOPQ8N4V2 548 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ST7LQ8TDW4 575 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 THEM6Q8WUY1 208 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ASB17Q8WXJ9 295 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 SLAMF6Q96DU3 332 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 MRPL48Q96GC5 212 aaKnown RBP8.17□□□□□ -1.1
PHGDH-228ENST00000641847 MAP6Q96JE9 813 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 WACQ9BTA9 647 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ABHD6Q9BV23 337 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 MND1Q9BWT6 205 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 CDCA4Q9BXL8 241 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 MRPS26Q9BYN8 205 aaKnown RBP8.17□□□□□ -1.1
PHGDH-228ENST00000641847 GSX2Q9BZM3 304 aa8.17□□□□□ -1.1
PHGDH-228ENST00000641847 ACTR6Q9GZN1 396 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms