RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 UBAP1Q9NZ09 502 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 N6AMT1Q9Y5N5 214 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 A0A087WXM4 84 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 M0R135 149 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 SULT1C4O75897 302 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 RPP14O95059 124 aaKnown RBP11.29□□□□□ -0.6
PHGDH-218ENST00000641491 SERPINA5P05154 406 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 SCG5P05408 212 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 ALOX5APP20292 161 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 PTAFRP25105 342 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
PHGDH-218ENST00000641491 CX3CR1P49238 355 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 RGS6P49758 472 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 HCCSP53701 268 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 RIPPLY3P57055 190 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 TAS2R43P59537 309 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 RPS23P62266 143 aaKnown RBP11.29□□□□□ -0.6
PHGDH-218ENST00000641491 GALEQ14376 348 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 C3orf36Q3SXR2 165 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 BEX5Q5H9J7 111 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 DEGS2Q6QHC5 323 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 LRRN1Q6UXK5 716 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 CFAP77Q6ZQR2 320 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-218ENST00000641491 PRSS48Q7RTY5 328 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 FAM169BQ8N8A8 192 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 FAM222BQ8WU58 562 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 SMAP2Q8WU79 429 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF799Q96GE5 643 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 MOB1AQ9H8S9 216 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 TRIM36Q9NQ86 728 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 ERVK13-1Q9NX77 482 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-218ENST00000641491 GRIP1Q9Y3R0 1128 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 PCDHGB5Q9Y5G0 923 aa11.29□□□□□ -0.6
PHGDH-218ENST00000641491 A1L4Q6 167 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 PSMD9O00233 223 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 TBX1O43435 398 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 IGHA1P01876 353 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 CD3EP07766 207 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 HTR1AP08908 422 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 CCKARP32238 428 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 SELENOVP59797 346 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 MED22Q15528 200 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 PCK2Q16822 640 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 BCL2L15Q5TBC7 163 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 SLC22A25Q6T423 547 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 RNF133Q8WVZ7 376 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 PGAM5Q96HS1 289 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 WFIKKN1Q96NZ8 548 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 OR8B4Q96RC9 309 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 KCNJ15Q99712 375 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 OR10A2Q9H208 303 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 BRD7Q9NPI1 651 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 ERVK-18Q9QC07 812 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 COPS3Q9UNS2 423 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
PHGDH-218ENST00000641491 TMEM269A0A1B0GVZ9 245 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 TMEM129A0AVI4 362 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 MAGEA13PA6NCF6 341 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 LOC110117498-PIK3R3F6TDL0 507 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 SYNGR3O43761 229 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 IGKV3-15P01624 115 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 MT-ND2P03891 347 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 LCATP04180 440 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 RPSAP08865 295 aaKnown RBP11.27□□□□□ -0.61
PHGDH-218ENST00000641491 MMP7P09237 267 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-218ENST00000641491 CECR9P0C854 216 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 EPXP11678 715 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.61
PHGDH-218ENST00000641491 RAD52P43351 418 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 PRKXP51817 358 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 WNT4P56705 351 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 SLC35A2P78381 396 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 MVKQ03426 396 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 TFF3Q07654 80 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 SNTB1Q13884 538 aaKnown RBP11.27□□□□□ -0.61
PHGDH-218ENST00000641491 TIGD6Q17RP2 521 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 GFOD2Q3B7J2 385 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 CCDC92Q53HC0 331 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF773Q6PK81 442 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 DRAM2Q6UX65 266 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 SYS1Q8N2H4 156 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 OR52N1Q8NH53 320 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 ST7LQ8TDW4 575 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 MAP6Q96JE9 813 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 DOK1Q99704 481 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms