RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 HSF1Q00613 529 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TOP3AQ13472 1001 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ACKR1Q16570 336 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 C3AR1Q16581 482 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TMEM225Q6GV28 225 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 LAIR2Q6ISS4 152 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 UGT2A3Q6UWM9 527 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 NHLRC1Q6VVB1 395 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 CFAP77Q6ZQR2 320 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 CNIH3Q8TBE1 160 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 APH1BQ8WW43 257 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 BCL2L2Q92843 193 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 CPNE4Q96A23 557 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 RASD2Q96D21 266 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 Q96M85 177 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 GPR137Q96N19 417 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 OXGR1Q96P68 337 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TSPAN32Q96QS1 320 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TXNIPQ9H3M7 391 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 PAQR5Q9NXK6 330 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 HAO2Q9NYQ3 351 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 RASD1Q9Y272 281 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 NOX1Q9Y5S8 564 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 IGSF10Q6WRI0 2623 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ZFYVE26Q68DK2 2539 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 A0A1B0GTH9 108 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 A0A1W2PRG6 482 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 SH3D21A4FU49 640 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 OR14I1A6ND48 311 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 RIIAD1A6NNX1 92 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF716A6NP11 495 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 H0Y8G0 127 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 IMPA2O14732 288 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TRAF3IP2O43734 574 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TOX4O94842 621 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 VAMP5O95183 116 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF735P0CB33 412 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 RANBP1P43487 201 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 RPL27P61353 136 aaKnown RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 POU3F1Q03052 451 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 KLRB1Q12918 225 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 GAMTQ14353 236 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 GPAT4Q86UL3 456 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 UEVLDQ8IX04 471 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ARIH2OSQ8N7S6 290 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 C11orf44Q8N8P7 122 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 BHLHE23Q8NDY6 225 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 OR52E2Q8NGJ4 325 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF519Q8TB69 540 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TBC1D15Q8TC07 691 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TMEM163Q8TC26 289 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 FAR1Q8WVX9 515 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 SARAFQ96BY9 339 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 PLEKHA8Q96JA3 519 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 FAM192AQ9GZU8 254 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 PNPLA3Q9NST1 481 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 KLHL13Q9P2N7 655 aa7.04□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF346Q9UL40 294 aaKnown RBP7.04□□□□□ -1.28
SCARB2-220ENST00000640076 FAM183AA6NL82 134 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 NPIPA2E9PIF3 369 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 NPIPA3F8WFD2 350 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 ZNHIT1O43257 154 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 IFNGP01579 166 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 DAP3P51398 398 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 F2RL1P55085 397 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 ITGADQ13349 1161 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 KRR1Q13601 381 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 C1DQ13901 141 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 CRMP1Q14194 572 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SLC17A1Q14916 467 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SMN1Q16637 294 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 MESTQ5EB52 335 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SLC25A30Q5SVS4 291 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 C6orf141Q5SZD1 244 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 PCSK4Q6UW60 755 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SLC35D2Q76EJ3 337 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 FCRLAQ7L513 359 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 BCDIN3DQ7Z5W3 292 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 MED12LQ86YW9 2145 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 PM20D2Q8IYS1 436 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 GHDCQ8N2G8 530 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 ZNF786Q8N393 782 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SLC37A3Q8NCC5 494 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 OR9K2Q8NGE7 335 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 OR4K13Q8NH42 304 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 ASB10Q8WXI3 467 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 ROBO4Q8WZ75 1007 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SNRNP40Q96DI7 357 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 TXNDC15Q96J42 360 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 LRR1Q96L50 414 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 NMNAT3Q96T66 252 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 DDOQ99489 341 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 SF3B5Q9BWJ5 86 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 FN3KQ9H479 309 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 HINT3Q9NQE9 182 aaKnown RBP7.03□□□□□ -1.28
SCARB2-220ENST00000640076 MED29Q9NX70 200 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 KLHL21Q9UJP4 597 aa7.03□□□□□ -1.28
SCARB2-220ENST00000640076 COL6A6A6NMZ7 2263 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms