RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 THEM4Q5T1C6 240 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 CEMP1Q6PRD7 247 aaPredicted RBP2.11□□□□□ -2.07
CCDC7-216ENST00000640058 CMTM1Q8IZ96 169 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 NUBPLQ8TB37 319 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 ABHD3Q8WU67 409 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 CAPSLQ8WWF8 208 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 COL21A1Q96P44 957 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 OR5B12Q96R08 314 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 SLC25A2Q9BXI2 301 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 AUNIPQ9H7T9 357 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 MRPS30Q9NP92 439 aaKnown RBP2.11□□□□□ -2.07
CCDC7-216ENST00000640058 KCNJ16Q9NPI9 418 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 TMED5Q9Y3A6 229 aa2.11□□□□□ -2.07
CCDC7-216ENST00000640058 IGLV1-50A0A075B6I6 118 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 KBTBD11-OT1A0A1B0GTJ5 212 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 A8MUU9 505 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 SMKR1H3BMG3 65 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 HUS1O60921 280 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 FKBP6O75344 327 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 FABP3P05413 133 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 BCHEP06276 602 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 ERCC1P07992 297 aaPredicted RBP2.1□□□□□ -2.07
CCDC7-216ENST00000640058 ATF6P18850 670 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 CEACAM6P40199 344 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 NAMPTP43490 491 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 TCP10Q12799 353 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 GINS1Q14691 196 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 QPRTQ15274 297 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 ARL9Q6T311 187 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 NTM-AS1Q6ZSK4 140 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 CBLN2Q8IUK8 224 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 OFCC1Q8IZS5 231 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 GABRG1Q8N1C3 465 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 CCDC148Q8NFR7 591 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 OR5K2Q8NHB8 316 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 FAM81AQ8TBF8 368 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 XPO6Q96QU8 1125 aaKnown RBP2.1□□□□□ -2.07
CCDC7-216ENST00000640058 C11orf70Q9BRQ4 267 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 MTG1Q9BT17 334 aaPredicted RBP2.1□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF586Q9NXT0 402 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 UVRAGQ9P2Y5 699 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 CLN8Q9UBY8 286 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 CARHSP1Q9Y2V2 147 aaKnown RBP2.1□□□□□ -2.07
CCDC7-216ENST00000640058 SCN1AP35498 2009 aa2.1□□□□□ -2.07
CCDC7-216ENST00000640058 KCNE1BA0A087WTH5 132 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 SERTM2A0A1B0GWG4 89 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 TMEM223A0PJW6 202 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 A6NDN8 102 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 SMCO2A6NFE2 343 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 NCBP2LA6PVI3 153 aaKnown RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 LSM1O15116 133 aaKnown RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 RAD51CO43502 376 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 GABARAPO95166 117 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 CDRT1O95170 752 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 HLA-DPB1P04440 258 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 UBTFL6P0CB48 400 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 MYL2P10916 166 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 BCKDHBP21953 392 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 OR1E1P30953 314 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 CSNK1A1P48729 337 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 STXBP1P61764 594 aaKnown RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 ARG2P78540 354 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 LOXL1Q08397 574 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 ILKQ13418 452 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 ITIH4Q14624 930 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 TRAM2Q15035 370 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 PTPN20Q4JDL3 420 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 TMEM53Q6P2H8 277 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 DNAJC24Q6P3W2 148 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 TTC23LQ6PF05 361 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 MBOAT1Q6ZNC8 495 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 SSX9Q7RTT3 188 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 LUZP2Q86TE4 346 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 NPWQ8N729 165 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 ZFP41Q8N8Y5 198 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 OR9G4Q8NGQ1 327 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 LYPD6BQ8NI32 183 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 NTAN1Q96AB6 310 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 DNAJC1Q96KC8 554 aaKnown RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 ACTR3CQ9C0K3 210 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 SYNDIG1Q9H7V2 258 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 TMEM9BQ9NQ34 198 aa2.09□□□□□ -2.07
CCDC7-216ENST00000640058 SAMSN1Q9NSI8 373 aaKnown RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 C20orf96Q9NUD7 363 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-216ENST00000640058 ADAMTS13Q76LX8 1427 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 GPATCH8Q9UKJ3 1502 aaKnown RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 A0A0U1RQV1 116 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 WRBO00258 174 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 ZNF207O43670 478 aaKnown RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 GCM2O75603 506 aaPredicted RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 SLC25A14O95258 325 aaPredicted RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 ARG1P05089 322 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 OR8G3PP0DMU2 310 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 ANXA8P13928 327 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 CTRB1P17538 263 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 WARSP23381 471 aaKnown RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 GTF2E2P29084 291 aaKnown RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 EIF3EP60228 445 aaKnown RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 CDC20Q12834 499 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 SLC39A6Q13433 755 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms