RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 IQCJQ1A5X6 159 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PCGF3Q3KNV8 242 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ENTHD1Q8IYW4 607 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 KDF1Q8NAX2 398 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR5AK2Q8NH90 309 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ELP4Q96EB1 424 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SLC25A44Q96H78 314 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ATP5SQ99766 215 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 DHRS9Q9BPW9 319 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR2B2Q9GZK3 357 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ELOVL5Q9NYP7 299 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SH2B3Q9UQQ2 575 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 TGOLN2O43493 480 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CRHP06850 196 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PGGT1BP53609 377 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 APOFQ13790 326 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GSG1LQ6UXU4 331 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF517Q6ZMY9 492 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 LILRB2Q8N423 598 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR8J3Q8NGG0 315 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR2T27Q8NH04 317 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SLC7A13Q8TCU3 470 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GPR148Q8TDV2 347 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 WNT2BQ93097 391 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 FOXRED1Q96CU9 486 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 TMED9Q9BVK6 235 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GON7Q9BXV9 100 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR52A5Q9H2C5 316 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SSU72Q9NP77 194 aaKnown RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SNTG1Q9NSN8 517 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 NLKQ9UBE8 527 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ZDHHC2Q9UIJ5 367 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 hADV38S2A0JD32 116 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 NPPBP16860 134 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ARNTP27540 789 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GFRA1P56159 465 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SLC30A7Q8NEW0 376 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR5D13Q8NGL4 314 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR5H2Q8NGV7 314 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR2T6Q8NHC8 308 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 NSUN5Q96P11 429 aaKnown RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM231Q9H6L2 316 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 POMPQ9Y244 141 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PIGLQ9Y2B2 252 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ITM2AO43736 263 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GLAP06280 429 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CELA2BP08218 269 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 MPGP29372 298 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PYCR1P32322 319 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PTGER1P34995 402 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CSN1S1P47710 185 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 C1orf220Q5T0J3 134 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 LPCAT4Q643R3 524 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 DHRS7BQ6IAN0 325 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PACRGLQ8N7B6 248 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR4A16Q8NH70 328 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR5R1Q8NH85 324 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 C19orf43Q9BQ61 176 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GAL3ST2Q9H3Q3 398 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF391Q9UJN7 358 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 DYSFO75923 2080 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 A0A087WV62 115 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GPR39O43194 453 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 UBOX5O94941 541 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ADAP00813 363 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR4A8P0C604 315 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 COX7A1P24310 79 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 IDH3AP50213 366 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 GYS2P54840 703 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 FXYD6P3P58550 94 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF181Q2M3W8 571 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SFXN4Q6P4A7 337 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ISCA2Q86U28 154 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PYDC1Q8WXC3 89 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SAMD8Q96LT4 415 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PSD2Q9BQI7 771 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 RHBDD3Q9Y3P4 386 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 FASNP49327 2511 aaKnown RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CEBPZOSA8MTT3 80 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CXorf49A8MYA2 514 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OIP5O43482 229 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ICOSLGO75144 302 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 RAC3P60763 192 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 UNC50Q53HI1 259 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 COX15Q7KZN9 410 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CLECL1Q8IZS7 167 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 LILRA3Q8N6C8 439 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ANKRD53Q8N9V6 530 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 WDR31Q8NA23 367 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR13C5Q8NGS8 318 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 OR13C2Q8NGS9 318 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 UBALD1Q8TB05 177 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF675Q8TD23 568 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 TMEM230Q96A57 120 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SEC22CQ9BRL7 303 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ALG12Q9BV10 488 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 QRSL1Q9H0R6 528 aaKnown RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 VAPAQ9P0L0 249 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PATJQ8NI35 1801 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms