RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FAM27D1Q5T7N8 215 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 BAP18Q8IXM2 172 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 ARIH2OSQ8N7S6 290 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 CT45A3Q8NHU0 189 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 WDR89Q96FK6 387 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-213ENST00000638680 V9GYS6 101 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 A0A1B0GUL6 1792 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 NUMA1Q14980 2115 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 CPN1P15169 458 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 OR1D5P58170 312 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 DCAF12Q5T6F0 453 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 OTPQ5XKR4 325 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 PLXDC2Q6UX71 529 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 LYG2Q86SG7 212 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 RTN4RL1Q86UN2 441 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-213ENST00000638680 MAML2Q8IZL2 1156 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-213ENST00000638680 SAT2Q96F10 170 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-213ENST00000638680 BARHL1Q9BZE3 327 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 B3GAT1Q9P2W7 334 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 ASH2LQ9UBL3 628 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 SLC23A1Q9UHI7 598 aa16.83■□□□□ 0.29
SCARB2-213ENST00000638680 TUBAL3A6NHL2 446 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 QDPRP09417 244 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 EPXP11678 715 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 EMDP50402 254 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 TFAP2EQ6VUC0 442 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 USP51Q70EK9 711 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 OR4C16Q8NGL9 310 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 UFSP2Q9NUQ7 469 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 TMEFF2Q9UIK5 374 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-213ENST00000638680 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 A0A1B0GX78 115 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 CER1O95813 267 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 IGHV3-9P01782 118 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 SLC37A2Q8TED4 501 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 DERL3Q96Q80 235 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 SLCO1B1Q9Y6L6 691 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 OR51F2Q8NH61 342 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 JAM3Q9BX67 310 aa16.83■□□□□ 0.28
SCARB2-213ENST00000638680 BTBD17A6NE02 478 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 UPK1AO00322 258 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 IGHEP01854 428 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 OR8B8Q15620 311 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 LINC00303Q3SY05 128 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 HSF5Q4G112 596 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-213ENST00000638680 GNPNAT1Q96EK6 184 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-213ENST00000638680 ASPDHA6ND91 283 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 GSTP1P09211 210 aaKnown RBP16.82■□□□□ 0.28
SCARB2-213ENST00000638680 MMP15P51511 669 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 ELAVL1Q15717 326 aaKnown RBP16.82■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF425Q6IV72 752 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF385DQ9H6B1 395 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 C12orf49Q9H741 205 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 KCNG2Q9UJ96 466 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF732B4DXR9 585 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 BCL2L11O43521 198 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 TRAF3IP2O43734 574 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-213ENST00000638680 RNF151Q2KHN1 245 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 SIRT6Q8N6T7 355 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 HNF1AP20823 631 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 FAM185AQ8N0U4 392 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 OR4F5Q8NH21 305 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 PPP1R1CQ8WVI7 109 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 OR4F4Q96R69 305 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 MOB1AQ9H8S9 216 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 GHRLQ9UBU3 117 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 PPP1R3CQ9UQK1 317 aa16.82■□□□□ 0.28
SCARB2-213ENST00000638680 IGLV3-27P01718 113 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 PRPH2P23942 346 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 SMIM4Q8WVI0 70 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 REEP6Q96HR9 211 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TOX2Q96NM4 488 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 SLC6A13Q9NSD5 602 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 CACNA1SQ13698 1873 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 HTRA4P83105 476 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-213ENST00000638680 DPTQ07507 201 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 KCNAB1Q14722 419 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 C4orf17Q53FE4 359 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 USB1Q9BQ65 265 aaKnown RBP16.81■□□□□ 0.28
SCARB2-213ENST00000638680 GPR84Q9NQS5 396 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 DUSP13Q9UII6 198 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 E5RGE8 158 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 H0Y8X5 98 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 LBX1P52954 281 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 ZFPM2Q8WW38 1151 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TVP23CQ96ET8 276 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF331Q9NQX6 463 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-213ENST00000638680 ING1Q9UK53 422 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-213ENST00000638680 NSG2Q9Y328 171 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 R4GMQ9 66 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 FAM221AA4D161 298 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 MLF1P58340 268 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TMEM268Q5VZI3 342 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 LINC00696Q6ZRV3 163 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 CALHM3Q86XJ0 350 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TSLPQ969D9 159 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 FAM103A1Q9BTL3 118 aaKnown RBP16.81■□□□□ 0.28
SCARB2-213ENST00000638680 LAT2Q9GZY6 243 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 SLC5A6Q9Y289 635 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms