RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ZXDAP98168 799 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SEMG2Q02383 582 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ELOBQ15370 118 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CST9Q5W186 159 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM163Q8TC26 289 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 MYOZ3Q8TDC0 251 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SLC45A3Q96JT2 553 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ACPTQ9BZG2 426 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 OR6C3Q9NZP0 311 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SPI1P17947 270 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 HIST1H3AP68431 136 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 KCNAB2Q13303 367 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 LHFPL2Q6ZUX7 228 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 FAM122BQ7Z309 247 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 RNF113BQ8IZP6 322 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 DBF4BQ8NFT6 615 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ECM29Q5VYK3 1845 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 FAM208AQ9UK61 1670 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GAGE10A6NGK3 116 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 DHRS7CA6NNS2 312 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS56P0CW18 603 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 HTR1DP28221 377 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GABRA5P31644 462 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 OR1D5P58170 312 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SQSTM1Q13501 440 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 BLOC1S3Q6QNY0 202 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM184AQ6ZMB5 413 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF429Q86V71 674 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 TCTEX1D1Q8N7M0 179 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 C2CD4AQ8NCU7 369 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GPR26Q8NDV2 337 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 OR1L4Q8NGR5 311 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 TMIGD2Q96BF3 282 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CXorf58Q96LI9 332 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 IER3IP1Q9Y5U9 82 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF724A8MTY0 619 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 B4E171 279 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 HAX1O00165 279 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SOCS6O14544 535 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SLC25A20O43772 301 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 LYPLA2O95372 231 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 HNRNPA1L2Q32P51 320 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 RNASEKQ6P5S7 137 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ABHD15Q6UXT9 468 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 PLPP7Q8NBV4 271 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SARAFQ96BY9 339 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 TRMT61AQ96FX7 289 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 WDR76Q9H967 626 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 LANCL2Q9NS86 450 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 C1RLQ9NZP8 487 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 FOXJ3Q9UPW0 622 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 Q9Y3F1 56 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 EFSO43281 561 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 PMS2P2O95744 297 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CAPNS1P04632 268 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ALDOCP09972 364 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CD38P28907 300 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 MC5RP33032 325 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 MLF1P58340 268 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CLN3Q13286 438 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 KHDC1Q4VXA5 237 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF385BQ569K4 471 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CHST14Q8NCH0 376 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 OR13J1Q8NGT2 312 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 OR13D1Q8NGV5 346 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 UTP4Q969X6 686 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZMYND19Q96E35 227 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 TRAPPC4Q9Y296 219 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 MYOCOSA0A1B0GUC4 107 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 YJEFN3A6XGL0 299 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF727A8MUV8 499 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 B4GALT5O43286 388 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 DOK2O60496 412 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CBR3O75828 277 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS2P07478 247 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SLC10A3P09131 477 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CLDN17P56750 224 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 JAM2P57087 298 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SORDQ00796 357 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 RING1Q06587 406 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 CMPK2Q5EBM0 449 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 PLAG1Q6DJT9 500 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF485Q8NCK3 441 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SCAMP5Q8TAC9 235 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 DTLQ9NZJ0 730 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 PTPRUQ92729 1446 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 UNCXA6NJT0 531 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 IFITM10A6NMD0 228 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 UMAD1C9J7I0 102 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF140P52738 457 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ARF6P62330 175 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 BEX5Q5H9J7 111 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 LIPIQ6XZB0 460 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 LYG2Q86SG7 212 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ADAT1Q9BUB4 502 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 NKX6-2Q9C056 277 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 EBF2Q9HAK2 575 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 FBXO8Q9NRD0 319 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms