RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 TIMM10BQ9Y5J6 103 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 SLC33A1O00400 549 aaPredicted RBP13.66□□□□□ -0.22
PMS1-221ENST00000624204 PPIHO43447 177 aaKnown RBP13.66□□□□□ -0.22
PMS1-221ENST00000624204 AK1P00568 194 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 IFNA17P01571 189 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 FCGR3AP08637 254 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 HLA-GP17693 338 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 CYCSP99999 105 aaKnown RBP13.66□□□□□ -0.22
PMS1-221ENST00000624204 MEP1BQ16820 701 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 CDCP2Q5VXM1 449 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 PRSS41Q7RTY9 318 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 MRGPRFQ96AM1 343 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 C14orf144Q96I85 54 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 GFOD1Q9NXC2 390 aa13.66□□□□□ -0.22
PMS1-221ENST00000624204 DNAJB12Q9NXW2 375 aaKnown RBP13.66□□□□□ -0.22
PMS1-221ENST00000624204 IGLON5A6NGN9 336 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 ARPC3O15145 178 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 NME2P1O60361 137 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 JMJD7P0C870 316 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 PAX6P26367 422 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 CCR2P41597 374 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 TSFMP43897 325 aaKnown RBP13.65□□□□□ -0.22
PMS1-221ENST00000624204 CDK3Q00526 305 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 RUNX2Q13950 521 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 MARCH3Q86UD3 253 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 ASB17Q8WXJ9 295 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 SLC25A44Q96H78 314 aaPredicted RBP13.65□□□□□ -0.22
PMS1-221ENST00000624204 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 OR13C7P0DN81 318 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 NDUFB7P17568 137 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 CMPK1P30085 196 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 SULT1A1P50225 295 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 RAB32Q13637 225 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 PDGFRLQ15198 375 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 PNLIPRP3Q17RR3 467 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 TMEM225Q6GV28 225 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 MARS2Q96GW9 593 aaKnown RBP13.65□□□□□ -0.22
PMS1-221ENST00000624204 TICRRQ7Z2Z1 1910 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 IL2RAP01589 272 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 GNALP38405 381 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 ARRB1P49407 418 aaPredicted RBP13.65□□□□□ -0.22
PMS1-221ENST00000624204 SSX2Q16385 188 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 ALG10Q5BKT4 473 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 OR10D4PQ8NGN7 298 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 SDHAF3Q9NRP4 125 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 GRHPRQ9UBQ7 328 aa13.65□□□□□ -0.22
PMS1-221ENST00000624204 MRPS23Q9Y3D9 190 aaKnown RBP13.65□□□□□ -0.22
PMS1-221ENST00000624204 MPDZO75970 2070 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 DOCK9Q9BZ29 2069 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 CXorf51AA0A1B0GTR3 108 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 FGF17O60258 216 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 CT62P0C5K7 136 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 SLC35G6P0C7Q6 338 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 RIDAP52758 137 aaKnown RBP13.64□□□□□ -0.23
PMS1-221ENST00000624204 DPTQ07507 201 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.64□□□□□ -0.23
PMS1-221ENST00000624204 CDC20BQ86Y33 519 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 OR8D1Q8WZ84 308 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 RBM18Q96H35 190 aaKnown RBP13.64□□□□□ -0.23
PMS1-221ENST00000624204 SLC17A5Q9NRA2 495 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 PUS1Q9Y606 427 aaKnown RBP eCLIP13.64□□□□□ -0.23
PMS1-221ENST00000624204 SPARCP09486 303 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 ALOX5APP20292 161 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 DNASE1L1P49184 302 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 NPY4RP50391 375 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 GPR18Q14330 331 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 AWAT2Q6E213 333 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 VN1R4Q7Z5H5 301 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 SLC43A2Q8N370 569 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 GAL3ST3Q96A11 431 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 ZNF587Q96SQ5 575 aaPredicted RBP13.64□□□□□ -0.23
PMS1-221ENST00000624204 SSX3Q99909 188 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 OPA3Q9H6K4 179 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 GAR1Q9NY12 217 aaKnown RBP13.64□□□□□ -0.23
PMS1-221ENST00000624204 UMAD1C9J7I0 102 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 B3GALT2O43825 422 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 C8AP07357 584 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 CX3CR1P49238 355 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 ASPHD2Q6ICH7 369 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 ZNF765Q7L2R6 523 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 ZDHHC22Q8N966 263 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 MFSD9Q8NBP5 474 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 OR2L8Q8NGY9 312 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 NUDT9Q9BW91 350 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 NMES1Q9C002 83 aa13.64□□□□□ -0.23
PMS1-221ENST00000624204 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 TNFSF12O43508 249 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 OR6A2O95222 327 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 PRPS1P60891 318 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 EIF5AP63241 154 aaKnown RBP13.63□□□□□ -0.23
PMS1-221ENST00000624204 OR10H2O60403 315 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 PNPP00491 289 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 PRH1P02810 166 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 PVRP15151 417 aa13.63□□□□□ -0.23
PMS1-221ENST00000624204 MIDNQ504T8 468 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms