RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 QDPRP09417 244 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 FOLR3P41439 243 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 RPS15P62841 145 aaKnown RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 MFAP5Q13361 173 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 GNMTQ14749 295 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 MEX3BQ6ZN04 569 aaKnown RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 MAFAQ8NHW3 353 aaPredicted RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 FNDC9Q8TBE3 224 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 EIF5A2Q9GZV4 153 aaKnown RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 SAV1Q9H4B6 383 aaPredicted RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 SLC5A6Q9Y289 635 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 MTCH2Q9Y6C9 303 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 R4GMQ9 66 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 SYNGR4O95473 234 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 OR4E1P0C645 316 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 GLI4P10075 376 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 PXDC1Q5TGL8 231 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 NHLRC1Q6VVB1 395 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 GLDNQ6ZMI3 551 aaPredicted RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 ATG4DQ86TL0 474 aaPredicted RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 OR1M1Q8NGA1 313 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 GPR84Q9NQS5 396 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 ZMAT5Q9UDW3 170 aaKnown RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 ST6GALNAC2Q9UJ37 374 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 DNAH12Q6ZR08 3092 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 NGFRP08138 427 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 ZNF806P0C7X5 589 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 MESTQ5EB52 335 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 LYPD8Q6UX82 237 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 OR1J4Q8NGS1 313 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 PIGCQ92535 297 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 OR51B6Q9H340 312 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 FBXO4Q9UKT5 387 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 CNOT1A5YKK6 2376 aaKnown RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 SNRPGP15A8MWD9 76 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 SDCBPO00560 298 aaPredicted RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 PIAS2O75928 621 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 NDUFB6O95139 128 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 GNB3P16520 340 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 CDAP32320 146 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 SELENOPP49908 381 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 AKR1C2P52895 323 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 RPS27AP62979 156 aaKnown RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 UBA52P62987 128 aaKnown RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 AKR1C1Q04828 323 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
MSH6-215ENST00000622629 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 ARSKQ6UWY0 536 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 SLC22A18ASQ8N1D0 253 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 SIT1Q9Y3P8 196 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 SPTBN2O15020 2390 aa11.57□□□□□ -0.56
MSH6-215ENST00000622629 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 ZNF254O75437 659 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 HOXC12P31275 282 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 SLC35A1P78382 337 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 RIPPLY1Q0D2K3 151 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 P4HA3Q7Z4N8 544 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 IL22RA1Q8N6P7 574 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 SCARB1Q8WTV0 552 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 MAP6Q96JE9 813 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 GAREM1Q9H706 876 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 MTFP1Q9UDX5 166 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 ICAM5Q9UMF0 924 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 OR5H14A6NHG9 310 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 IGHV4-34P06331 123 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 TMIGD3P0DMS9 266 aaPredicted RBP11.56□□□□□ -0.56
MSH6-215ENST00000622629 CAV2P51636 162 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 FUT7Q11130 342 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
MSH6-215ENST00000622629 FAM74A1Q5RGS3 127 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 TEX19Q8NA77 164 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 MAFIPQ8WZ33 124 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 ST8SIA1Q92185 356 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 CMBLQ96DG6 245 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 CENPFP49454 3210 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 IGHV1OR21-1A0A087WYE8 117 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 IGHV1OR15-9A0A0B4J2B8 117 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 GJE1A6NN92 205 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 ALG1L2C9J202 215 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 OR7C1O76099 320 aaPredicted RBP11.56□□□□□ -0.56
MSH6-215ENST00000622629 IL9P15248 144 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 OR52W1Q6IF63 320 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 C11orf40Q8WZ69 217 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 B8ZZF3 427 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 KRBOX1C9JBD0 128 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 DCTN6O00399 190 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 DIRAS3O95661 229 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 HTR5AP47898 357 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 CX3CR1P49238 355 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 SLC37A1P57057 533 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 EXOSC6Q5RKV6 272 aaKnown RBP11.56□□□□□ -0.56
MSH6-215ENST00000622629 ZNF100Q8IYN0 542 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 BATF2Q8N1L9 274 aa11.56□□□□□ -0.56
MSH6-215ENST00000622629 ZC3H10Q96K80 434 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms