RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CXorf36Q9H7Y0 433 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 BRF2Q9HAW0 419 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 STEAP1Q9UHE8 339 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ST6GALNAC2Q9UJ37 374 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 MTCH2Q9Y6C9 303 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 C20orf202A1L168 122 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 VSTM2BA6NLU5 285 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 M0QYG6 137 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CDC14BO60729 498 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 GPANK1O95872 356 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 TBX6O95947 436 aaPredicted RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 F13BP05160 661 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CSN2P05814 226 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CXCL1P09341 107 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SLC6A12P48065 614 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 RPS13P62277 151 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 ACTC1P68032 377 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ACTA1P68133 377 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CYCSP99999 105 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 CDK5R1Q15078 307 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 FBXW9Q5XUX1 488 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 FAM180AQ6UWF9 173 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 LYG2Q86SG7 212 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ZSCAN4Q8NAM6 433 aaPredicted RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 PLPP5Q8NEB5 264 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 PBDC1Q9BVG4 233 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 RSPO3Q9BXY4 272 aaPredicted RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 PARP12Q9H0J9 701 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 SEMA5BQ9P283 1151 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 KDELR3O43731 214 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 DUSP11O75319 330 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 AIFM1O95831 613 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 IL18BPO95998 194 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CD22P20273 847 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 AKT2P31751 481 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SLC6A9P48067 706 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 MANFP55145 182 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 MLF1P58340 268 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SIRPAP78324 504 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 PAX5Q02548 391 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ZNF85Q03923 595 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ST3GAL3Q11203 375 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 KCNMB1Q16558 191 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CTXN3Q4LDR2 81 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 MIDNQ504T8 468 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SLC16A14Q7RTX9 510 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 TMPRSS12Q86WS5 348 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CFAP52Q8N1V2 620 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 OR2C3Q8N628 320 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SUMF2Q8NBJ7 301 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SFXN5Q8TD22 340 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 RNASEH2CQ8TDP1 164 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 FRZBQ92765 325 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 NINJ1Q92982 152 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 MOAP1Q96BY2 351 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 FAAP24Q9BTP7 215 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 GPR174Q9BXC1 333 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 LPAR2Q9HBW0 351 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SERINC1Q9NRX5 453 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 IL36AQ9UHA7 158 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CUL9Q8IWT3 2517 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 TGIF2-C20orf24A0A0A6YYL0 155 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 A0A1W2PQH9 124 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 FAM171A2A8MVW0 826 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 SAP18O00422 153 aaKnown RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 ZNF821O75541 412 aaPredicted RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 SCGNO76038 276 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 MELTFP08582 738 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 ZNF10P21506 573 aaPredicted RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 SNCAP37840 140 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 RGRP47804 291 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 IDH3GP51553 393 aaPredicted RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 SOX8P57073 446 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 UBE2KP61086 200 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 EIF4EBP2Q13542 120 aaPredicted RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 HAGHQ16775 308 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 ZXDCQ2QGD7 858 aaPredicted RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 RPL7L1Q6DKI1 246 aaKnown RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 VRK2Q86Y07 508 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 DND1Q8IYX4 353 aaKnown RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 GJD3Q8N144 294 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 OR6K2Q8NGY2 324 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 MITD1Q8WV92 249 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 HPSE2Q8WWQ2 592 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 IGSF8Q969P0 613 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 YPEL4Q96NS1 127 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 SLC12A9Q9BXP2 914 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 P2RX2Q9UBL9 471 aa7.15□□□□□ -1.26
VPS11-209ENST00000622309 ZNF346Q9UL40 294 aaKnown RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 PCYT1BQ9Y5K3 369 aaPredicted RBP7.15□□□□□ -1.26
VPS11-209ENST00000622309 NME2P1O60361 137 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 ZNF354AO60765 605 aaPredicted RBP7.15□□□□□ -1.27
VPS11-209ENST00000622309 LIPFP07098 398 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 NID1P14543 1247 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 HLA-GP17693 338 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 PPICP45877 212 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 IL24Q13007 206 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms