RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 FAM162AQ96A26 154 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 RSRC1Q96IZ7 334 aaKnown RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 C7orf34Q96L11 122 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF48Q96MX3 618 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 OR2V2Q96R30 315 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 EGLN1Q9GZT9 426 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 NUAK2Q9H093 628 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 WDR76Q9H967 626 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 ELOVL3Q9HB03 270 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 VSX1Q9NZR4 365 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 ABCD2Q9UBJ2 740 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 GRHPRQ9UBQ7 328 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 ZDHHC8Q9ULC8 765 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 NDRG4Q9ULP0 352 aaKnown RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 PPIAL4AQ9Y536 164 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 LHFPL6Q9Y693 200 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 TGP01266 2768 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 J3QLI3 93 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 SLC22A2O15244 555 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 MLNRO43193 412 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 H1F0P07305 194 aaKnown RBP9.61□□□□□ -0.87
CPNE3-210ENST00000621245 COX5BP10606 129 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 PSKH1P11801 424 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 ANPEPP15144 967 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 SDHAP31040 664 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 COMPP49747 757 aaPredicted RBP9.61□□□□□ -0.87
CPNE3-210ENST00000621245 ARHGDIAP52565 204 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 UBA52P62987 128 aaKnown RBP9.61□□□□□ -0.87
CPNE3-210ENST00000621245 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 AQP6Q13520 282 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 MOGQ16653 247 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 FAM201AQ5SY85 155 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 OR2T2Q6IF00 324 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 USP43Q70EL4 1123 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 FKBP9P1Q75LS8 142 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 ARPINQ7Z6K5 226 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 RNF113BQ8IZP6 322 aaKnown RBP9.61□□□□□ -0.87
CPNE3-210ENST00000621245 SIGLECL1Q8N7X8 197 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 NPEPL1Q8NDH3 523 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 OR52J3Q8NH60 311 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 OR1F12Q8NHA8 337 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 FNDC8Q8TC99 324 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 ZFAND2BQ8WV99 257 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 KCTD14Q9BQ13 255 aaPredicted RBP9.61□□□□□ -0.87
CPNE3-210ENST00000621245 FN3KQ9H479 309 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 NRIP3Q9NQ35 241 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 CYSLTR2Q9NS75 346 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 TBCCD1Q9NVR7 557 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 PLEK2Q9NYT0 353 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 IER3IP1Q9Y5U9 82 aa9.61□□□□□ -0.87
CPNE3-210ENST00000621245 IGHV3OR16-10A0A075B7F0 116 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 IGLV1-36A0A0B4J1U3 117 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 A0A1W2PRQ8 180 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 HTR3EA5X5Y0 456 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 C5orf63A6NC05 138 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 XKRYO14609 159 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 NDUFB2O95178 105 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 CYB5R3P00387 301 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-210ENST00000621245 SEMG1P04279 462 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF12P17014 697 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 EGR1P18146 543 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 PMELP40967 661 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 MAP2K3P46734 347 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 SLC6A9P48067 706 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 PSME3P61289 254 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 BTG1P62324 171 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 HIST1H3AP68431 136 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 DGCR6Q14129 220 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 ANKDD1AQ495B1 522 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 AWAT1Q58HT5 328 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 HIST2H3PS2Q5TEC6 136 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 CFAP77Q6ZQR2 320 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 HIST2H3AQ71DI3 136 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 LINC00346Q8IVM7 164 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 GLB1L2Q8IW92 636 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 BPIFB2Q8N4F0 458 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 BHLHE23Q8NDY6 225 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 HAVCR1Q96D42 359 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 DHRS1Q96LJ7 313 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 GPX7Q96SL4 187 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-210ENST00000621245 MYLK2Q9H1R3 596 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 PATZ1Q9HBE1 687 aaKnown RBP9.6□□□□□ -0.87
CPNE3-210ENST00000621245 GCM1Q9NP62 436 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 MRGBPQ9NV56 204 aa9.6□□□□□ -0.87
CPNE3-210ENST00000621245 CGGBP1Q9UFW8 167 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-210ENST00000621245 UNC119BA6NIH7 251 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 CEACAM18A8MTB9 384 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 F5H5P2 479 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 TMEM178BH3BS89 294 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 TRIM77I1YAP6 450 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 WIPF1O43516 503 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 KHDRBS3O75525 346 aaKnown RBP9.59□□□□□ -0.87
CPNE3-210ENST00000621245 IGHV4-38-2P0DP08 117 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 GSTM3P21266 225 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 IFNA8P32881 189 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 MSX2P35548 267 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-210ENST00000621245 LIPAP38571 399 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 MDH1P40925 334 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms