RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DPCDQ9BVM2 203 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SARGQ9BW04 601 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 WNT16Q9UBV4 365 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 LOC102725191A0A1B0GVB3 256 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 A8MVM7 634 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 C5orf67F2Z3F1 127 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ARPC1BO15143 372 aaKnown RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 CDC14BO60729 498 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 IFNA17P01571 189 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 QDPRP09417 244 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 B4GALT1P15291 398 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SSTR2P30874 369 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 RAD52P43351 418 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 FGFBP1Q14512 234 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 TGIF1Q15583 401 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 TMEM71Q6P5X7 295 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 GFRALQ6UXV0 394 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SIAH3Q8IW03 269 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 OR4D9Q8NGE8 314 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 BRIX1Q8TDN6 353 aaKnown RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 GDF15Q99988 308 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 PRSS27Q9BQR3 290 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 CCDC86Q9H6F5 360 aaKnown RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 CMC2Q9NRP2 79 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 FZR1Q9UM11 496 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 V9GY05 133 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 BHLHE40O14503 412 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 NID1P14543 1247 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ATF4P18848 351 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 PTBP1P26599 531 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC35A1P78382 337 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 DUSP8Q13202 625 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 CLN3Q13286 438 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 PDCD1Q15116 288 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF425Q6IV72 752 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 CXorf67Q86X51 503 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 BCORP1Q8N888 145 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SUMF1Q8NBK3 374 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SUN5Q8TC36 379 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 CMSS1Q9BQ75 279 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 OR51J1Q9H342 316 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 DECR2Q9NUI1 292 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 GTF3C1Q12789 2109 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 TLN2Q9Y4G6 2542 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 HEATR1Q9H583 2144 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 EPOPA6NHQ4 379 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 H3BMH7 237 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 M0R233 179 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 KLF4O43474 513 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC22A5O76082 557 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 NSA2O95478 260 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 TCRBP04435 133 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ACSM1Q08AH1 577 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ACKR1Q16570 336 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 GPR139Q6DWJ6 353 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF767PQ75MW2 155 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF695Q8IW36 515 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 LILRB2Q8N423 598 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 RFLNBQ8N5W9 214 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 TMEM185AQ8NFB2 350 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SP7Q8TDD2 431 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 C10orf90Q96M02 699 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 HES7Q9BYE0 225 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 FAM117AQ9C073 453 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 NGBQ9NPG2 151 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 EHFQ9NZC4 300 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 IGF2RP11717 2491 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 KIF26AQ9ULI4 1882 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 FER1L5A0AVI2 2057 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 TRAV36DV7A0A075B6V5 113 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNHIT1O43257 154 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 CREBL2O60519 120 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC34A2O95436 690 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 CD63P08962 238 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 TSFMP43897 325 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 C3AR1Q16581 482 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 GLYATL3Q5SZD4 288 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 PWWP2BQ6NUJ5 590 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 OR2L13Q8N349 312 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 OR5L1Q8NGL2 311 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 KCNE4Q8WWG9 221 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SIGLEC7Q9Y286 467 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC17A4Q9Y2C5 497 aa7.48□□□□□ -1.21
PTPDC1-204ENST00000620992 C5orf49A4QMS7 147 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 STMND1H3BQB6 276 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 GPR171O14626 319 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 TNFSF11O14788 317 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 RFPL3O75679 317 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 YIF1AO95070 293 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CDAP32320 146 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CCR5P51681 352 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 FZD5Q13467 585 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 TNK1Q13470 666 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CAMK2BQ13554 666 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CREB3L2Q70SY1 520 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 H1FNTQ75WM6 255 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms