RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SLC35B3Q9H1N7 401 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 DECR2Q9NUI1 292 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 LRIT1Q9P2V4 623 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 RGPD5Q99666 1765 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ARRDC5A6NEK1 342 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF593O00488 134 aaPredicted RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TCF21O43680 179 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 NQO2P16083 231 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 CCR6P51684 374 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 CDKN3Q16667 212 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 FAM74A3Q4VXF1 159 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 NHSL2Q5HYW2 709 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR8G2PQ6IF36 304 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 LYG2Q86SG7 212 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 DND1Q8IYX4 353 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 BOD1Q96IK1 185 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 NSG1A0A0A6YYJ2 146 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 IGLON5A6NGN9 336 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SEMA7AO75326 666 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 GLI3P10071 1580 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 XCR1P46094 333 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TXNRD3NBQ6F5E7 133 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR4A47Q6IF82 309 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 Q6ZN92 141 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SYT9Q86SS6 491 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF429Q86V71 674 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF595Q8IYB9 648 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 GLIS1Q8NBF1 620 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR4A4PQ8NGN8 299 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TOE1Q96GM8 510 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 VCX2Q9H322 139 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 HSPB8Q9UJY1 196 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TRAV36DV7A0A075B6V5 113 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 IGKV6D-41A0A0C4DH26 115 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 H3BML4 177 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SOCS6O14544 535 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 GLCEO94923 617 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 PMP2P02689 132 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 COL19A1Q14993 1142 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 OR7E24Q6IFN5 339 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 Q6ZVL8 140 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 MFSD4AQ8N468 514 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 LSMEM1Q8N8F7 131 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 OR51S1Q8NGJ8 323 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 MED16Q9Y2X0 877 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 NOSIPQ9Y314 301 aaKnown RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SCN4AP35499 1836 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 DUXBA0A1W2PPF3 345 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 GABRR3A8MPY1 467 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SGK494L7N484 410 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SIAH2O43255 324 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 LEFTY1O75610 366 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 EDN1P05305 212 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 CTSLP07711 333 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 POU3F2P20265 443 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 GALR1P47211 349 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ELLP55199 621 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 MBTPS1Q14703 1052 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 DCAF12Q5T6F0 453 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 GABRG1Q8N1C3 465 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 CST4P01036 141 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 BTF3P20290 206 aaKnown RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF718Q3SXZ3 478 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF789Q5FWF6 425 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ULBP3Q9BZM4 244 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 BARX1Q9HBU1 254 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SLC17A5Q9NRA2 495 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 POLDIP2Q9Y2S7 368 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 C5orf52A6NGY3 159 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 C17orf105B2RV13 164 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF264O43296 627 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF354AO60765 605 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SDHAP31040 664 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 HTR5AP47898 357 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 PSMB2P49721 201 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 RNF175Q8N4F7 328 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM102Q8N9M5 508 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 GJC3Q8NFK1 279 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SLC35A4Q96G79 324 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 PRO1933Q9H354 126 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF552Q9H707 407 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 ING1Q9UK53 422 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 SHPRHQ149N8 1683 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 TSPAN12O95859 305 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 WNT11O96014 354 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 TMIGD3P0DMS9 266 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 GALP22466 123 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 RPEL1Q2QD12 228 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 KIAA1958Q8N8K9 716 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 OR2G2Q8NGZ5 317 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 PEX11GQ96HA9 241 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 CPPED1Q9BRF8 314 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 TINAGL1Q9GZM7 467 aaPredicted RBP6.57□□□□□ -1.36
COLCA1-205ENST00000620864 IKZF5Q9H5V7 419 aa6.57□□□□□ -1.36
COLCA1-205ENST00000620864 TRAPPC4Q9Y296 219 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms