RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 KCNIP2Q9NS61 270 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SLC39A9Q9NUM3 307 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 CLEC2DQ9UHP7 191 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 USP54Q70EL1 1684 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 LINC01387J3KSC0 135 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 LIPNQ5VXI9 398 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 LYPD8Q6UX82 237 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 FAM109AQ8N4B1 249 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 PHYHIPQ92561 330 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 RPL3LQ92901 407 aaKnown RBP10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SLA2Q9H6Q3 261 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ISYNA1Q9NPH2 558 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 TLE4Q04727 773 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 MDGA2Q7Z553 956 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 MZB1Q8WU39 189 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 LOXHD1Q8IVV2 1947 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SULT1C2O00338 296 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SSTR2P30874 369 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF83P51522 516 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 OR2B11Q5JQS5 317 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 OR8G2PQ6IF36 304 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF620Q6ZNG0 422 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF767PQ75MW2 155 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 PRSS35Q8N3Z0 413 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF321PQ8N8H1 164 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 C17orf50Q8WW18 174 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 VN1R1Q9GZP7 353 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 PBOV1Q9GZY1 135 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 SLCO5A1Q9H2Y9 848 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ACER3Q9NUN7 267 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ETHE1O95571 254 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 CRYZL1O95825 349 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 CTXN2P0C2S0 81 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 BMP5P22003 454 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 ST8SIA4Q92187 359 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 S1PR3Q99500 378 aa10.32□□□□□ -0.76
CLIP1-219ENST00000620786 C7orf72A4D263 438 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 DVL1O14640 695 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 SBK2P0C263 348 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ARRB2P32121 409 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 HAAOP46952 286 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 DVL1P1P54792 670 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 B4GALNT1Q00973 533 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ADGRF3Q8IZF5 1079 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ANKRD53Q8N9V6 530 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 OR52H1Q8NGJ2 320 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ALKBH3Q96Q83 286 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 TXN2Q99757 166 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 CMC2Q9NRP2 79 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 SLC23A1Q9UHI7 598 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 LRP5O75197 1615 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 CHRM2P08172 466 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 HLA-DOBP13765 273 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 CEACAM16Q2WEN9 425 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 PRSS36Q5K4E3 855 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 CDC20BQ86Y33 519 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 LGI3Q8N145 548 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 KIAA1958Q8N8K9 716 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 AKR7LQ8NHP1 331 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 FAM213BQ8TBF2 198 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 CT55Q8WUE5 264 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 POFUT1Q9H488 388 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 F6UZH7 168 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 DHHO43323 396 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 MGST1P10620 155 aaKnown RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 LRRC10Q5BKY1 277 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 FAM74A1Q5RGS3 127 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 LRFN5Q96NI6 719 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 TRDV1A0A1B0GX56 115 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 CDAP32320 146 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 GSG1Q2KHT4 349 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 BSCL2Q96G97 398 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 MRGPRX3Q96LB0 322 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 MBOAT4Q96T53 435 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ARPC5LQ9BPX5 153 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 SPNS1Q9H2V7 528 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 A3GALT2U3KPV4 340 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 MYO9BQ13459 2157 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 AGAP14A8MT82 685 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF705FA8MVS1 300 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 NDUFB3O43676 98 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 POU2F2P09086 479 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF705DP0CH99 300 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF705BP0CI00 300 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 PSMB1P20618 241 aaKnown RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 TATDN3Q17R31 274 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 GPBAR1Q8TDU6 330 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 ESRP2Q9H6T0 727 aaKnown RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 METTL17Q9H7H0 456 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-219ENST00000620786 PRELID1Q9Y255 219 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 MTCH2Q9Y6C9 303 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 R4GMQ9 66 aa10.31□□□□□ -0.76
CLIP1-219ENST00000620786 KLK8O60259 260 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 CELA2BP08218 269 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 IGFBP1P08833 259 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms