RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 SPEF1Q9Y4P9 236 aa13.7□□□□□ -0.22
MALAT1-213ENST00000618227 TENM4Q6N022 2769 aa13.7□□□□□ -0.22
MALAT1-213ENST00000618227 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 IGHV2OR16-5A0A0B4J2B6 119 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 A0A1W2PQL4 384 aaPredicted RBP13.69□□□□□ -0.22
MALAT1-213ENST00000618227 ACOD1A6NK06 481 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 A6NNC1 897 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 MRPS14O60783 128 aaKnown RBP13.69□□□□□ -0.22
MALAT1-213ENST00000618227 FAM20BO75063 409 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 CD3EP07766 207 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 CRHBPP24387 322 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 APEX1P27695 318 aaKnown RBP13.69□□□□□ -0.22
MALAT1-213ENST00000618227 TPTEP56180 551 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 BSPH1Q075Z2 132 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 GALEQ14376 348 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 RSPO1Q2MKA7 263 aaPredicted RBP13.69□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF684Q5T5D7 378 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 ADAM5Q6NVV9 412 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 DRAM2Q6UX65 266 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 PLEKHG7Q6ZR37 379 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 HAVCR2Q8TDQ0 301 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 MYDGFQ969H8 173 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 TMEM80Q96HE8 168 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 COG8Q96MW5 612 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 ELOVL3Q9HB03 270 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 CDH20Q9HBT6 801 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 UBAP1Q9NZ09 502 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 COPS3Q9UNS2 423 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 KLHDC2Q9Y2U9 406 aa13.69□□□□□ -0.22
MALAT1-213ENST00000618227 EXOSC1Q9Y3B2 195 aaKnown RBP13.69□□□□□ -0.22
MALAT1-213ENST00000618227 DAPL1A0PJW8 107 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 SIAH2O43255 324 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 XPNPEP2O43895 674 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 CELA3BP08861 270 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 H2BFMP0C1H6 154 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 RAD52P43351 418 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 HCCSP53701 268 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ACTA2P62736 377 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ACTG2P63267 376 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 SLC35A2P78381 396 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ST3GAL4Q11206 333 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 TAF13Q15543 124 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 CDONQ4KMG0 1287 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ALKBH2Q6NS38 261 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 TMEM154Q6P9G4 183 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 COLCA1Q6ZS62 124 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 KRT77Q7Z794 578 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.68□□□□□ -0.22
MALAT1-213ENST00000618227 SYS1Q8N2H4 156 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF540Q8NDQ6 660 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 NUP37Q8NFH4 326 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ITFG2Q969R8 447 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 AMELYQ99218 206 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF649Q9BS31 505 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 COPS4Q9BT78 406 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 CENPMQ9NSP4 180 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 EIF3KQ9UBQ5 218 aaKnown RBP13.68□□□□□ -0.22
MALAT1-213ENST00000618227 MYRFQ9Y2G1 1151 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 LRCH1Q9Y2L9 728 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 RNF115Q9Y4L5 304 aa13.68□□□□□ -0.22
MALAT1-213ENST00000618227 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
MALAT1-213ENST00000618227 ADGRG4Q8IZF6 3080 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 C5orf49A4QMS7 147 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 METTL15A6NJ78 407 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 ABCD4O14678 606 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 KRT8P05787 483 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 TACSTD2P09758 323 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 ACSM4P0C7M7 580 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 MYL12AP19105 171 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 NR4A1P22736 598 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 GALK2Q01415 458 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF85Q03923 595 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 MRPL28Q13084 256 aaKnown RBP13.67□□□□□ -0.22
MALAT1-213ENST00000618227 MYPOPQ86VE0 399 aaPredicted RBP13.67□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF786Q8N393 782 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 SNX33Q8WV41 574 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 C4orf45Q96LM5 186 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 C1QTNF5Q9BXJ0 243 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 CDCA4Q9BXL8 241 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 BCL2L14Q9BZR8 327 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
MALAT1-213ENST00000618227 ERVK13-1Q9NX77 482 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 SLCO1C1Q9NYB5 712 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 CAB39Q9Y376 341 aaPredicted RBP13.67□□□□□ -0.22
MALAT1-213ENST00000618227 PCDHGB5Q9Y5G0 923 aa13.67□□□□□ -0.22
MALAT1-213ENST00000618227 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 VSTM5A8MXK1 200 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 H3BSA7 217 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 M0R135 149 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 CTAG2O75638 210 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 APOL3O95236 402 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 ABHD16AO95870 558 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 CDK1P06493 297 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 HSD11B1P28845 292 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 CALCRP30988 508 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 MMP16P51512 607 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 RIDAP52758 137 aaKnown RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 UCP2P55851 309 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms