RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ABCG5Q9H222 651 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 AUNIPQ9H7T9 357 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 RNF121Q9H920 327 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 N6AMT1Q9Y5N5 214 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 FLVCR1Q9Y5Y0 555 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 MEIOCA2RUB1 952 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 A6NL46 340 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF716A6NP11 495 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 DHHO43323 396 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 TMIGD3P0DMS9 266 aaPredicted RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 FSTP19883 344 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 MSR1P21757 451 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 NTF4P34130 210 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 ART1P52961 327 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 PSMA6P60900 246 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 PLET1Q6UQ28 207 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 LINGO2Q7L985 606 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 PRSS33Q8NF86 280 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR51D1Q8NGF3 324 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF837Q96EG3 531 aaPredicted RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 ULBP2Q9BZM5 246 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 KCNK15Q9H427 330 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 CELSR3Q9NYQ7 3312 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 A0A0B4J293 547 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 FAM166BA8MTA8 275 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC2A1P11166 492 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 GUCA1AP43080 201 aaPredicted RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 RSBN1Q5VWQ0 802 aaPredicted RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 C20orf196Q8IYI0 205 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 DUSP18Q8NEJ0 188 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 PNPLA2Q96AD5 504 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 NABP1Q96AH0 204 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 S100A16Q96FQ6 103 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF845Q96IR2 970 aaPredicted RBP15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 NELFAQ9H3P2 528 aa15.32■□□□□ 0.04
PCDHGC3-205ENST00000617641 ARGFXA6NJG6 315 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CDRT15L2A8MXV6 281 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 ANOS1P23352 680 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CDK2P24941 298 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 EIF2B2P49770 351 aaKnown RBP15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 LSM6P62312 80 aaKnown RBP15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 ENDOGQ14249 297 aaKnown RBP15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 RAB11BQ15907 218 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 FOXL2NBQ6ZUU3 175 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 LRRC18Q8N456 261 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CHAC2Q8WUX2 184 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 RAB40AQ8WXH6 277 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 HAVCR1Q96D42 359 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 TTTY12Q9BZ98 90 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 B4GALT7Q9UBV7 327 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 DMXL1Q9Y485 3027 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC17A2O00624 439 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CTDSPLO15194 276 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CFPP27918 469 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 DDOSTP39656 456 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 MAGEA5P43359 124 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 PTH2RP49190 550 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF121P58317 390 aaPredicted RBP15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 SPOCK1Q08629 439 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 TMEM69Q5SWH9 247 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 ABLIM2Q6H8Q1 611 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 LUZP2Q86TE4 346 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 VASH2Q86V25 355 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 GALNT16Q8N428 558 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 SMIM4Q8WVI0 70 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 UPRTQ96BW1 309 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 FGGYQ96C11 551 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CGGBP1Q9UFW8 167 aaPredicted RBP15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 NUFIP1Q9UHK0 495 aaKnown RBP15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 CACNG2Q9Y698 323 aa15.31■□□□□ 0.04
PCDHGC3-205ENST00000617641 TTLL8A6PVC2 850 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 SYT7O43581 403 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 GSTZ1O43708 216 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 HPNP05981 417 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 CX3CR1P49238 355 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 POU3F4P49335 361 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 EFNB2P52799 333 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 HACD4Q5VWC8 232 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 FAM166AQ6J272 317 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 RHOUQ7L0Q8 258 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 TOMM5Q8N4H5 51 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR51E1Q8TCB6 317 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 INTS12Q96CB8 462 aaKnown RBP15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 NIPAL2Q9H841 368 aa15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF275Q9NSD4 429 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 NCOA6Q14686 2063 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-205ENST00000617641 PTHLHP12272 177 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 CD82P27701 267 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 GALK2Q01415 458 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 SRSF6Q13247 344 aaKnown RBP15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 GALNTL5Q7Z4T8 443 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 SIAH3Q8IW03 269 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR8B12Q8NGG6 310 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 FAM3DQ96BQ1 224 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC6A15Q9H2J7 730 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 DCDC2BA2VCK2 349 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 BTCP35070 178 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF84P51523 738 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 SCAND1P57086 179 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 SRYQ05066 204 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms