RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 RER1O15258 196 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 COX4I1P13073 169 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 PRTN3P24158 256 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 GSK3BP49841 420 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 ESCO2Q56NI9 601 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 GPR139Q6DWJ6 353 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 C8orf82Q6P1X6 216 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 PTCHD4Q6ZW05 846 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 MUC20Q8N307 709 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 ATG16L2Q8NAA4 619 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 OR10AD1Q8NGE0 317 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZNF420Q8TAQ5 688 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 FAM162AQ96A26 154 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZNF48Q96MX3 618 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 NUAK2Q9H093 628 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 OR5V1Q9UGF6 321 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 J3QW42 95 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 GPANK1O95872 356 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 H1F0P07305 194 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 NCK1P16333 377 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 FXYD6P3P58550 94 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 FOXL1Q12952 345 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 OR2T2Q6IF00 324 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 FBXW12Q6X9E4 464 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 RSRC1Q96IZ7 334 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 MEGF10Q96KG7 1140 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 GPA33Q99795 319 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 HOPXQ9BPY8 73 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZNF747Q9BV97 191 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 ATPIF1Q9UII2 106 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 IER3IP1Q9Y5U9 82 aa17.43■□□□□ 0.38
TRAPPC3-208ENST00000616074 A0A1W2PRQ8 180 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 H0YL77 283 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZNF205O95201 554 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 CYB5R3P00387 301 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 WNT2P09544 360 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 CDKN2AP42771 156 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 OMPP47874 163 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 RGS6P49758 472 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 DGCR6Q14129 220 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 KCNMB1Q16558 191 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 FGD3Q5JSP0 725 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 ADCK1Q86TW2 530 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 OR8G5Q8NG78 346 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 LRCH1Q9Y2L9 728 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 POLR1DQ9Y2S0 133 aa17.42■□□□□ 0.38
TRAPPC3-208ENST00000616074 DOCK11Q5JSL3 2073 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 TMPRSS2O15393 492 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 MLNRO43193 412 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 CD80P33681 288 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 PAX2Q02962 417 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 PAX8Q06710 450 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 BAMBIQ13145 260 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 MEP1BQ16820 701 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 SLC27A4Q6P1M0 643 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 OR5L1Q8NGL2 311 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 OR13G1Q8NGZ3 307 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 APOBEC3DQ96AK3 386 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 TSSK2Q96PF2 358 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 KCTD14Q9BQ13 255 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 SSBP3Q9BWW4 388 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZMAT3Q9HA38 289 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 TMEM165Q9HC07 324 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 NDUFAF4Q9P032 175 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 LHFPL6Q9Y693 200 aa17.41■□□□□ 0.38
TRAPPC3-208ENST00000616074 IGHV3OR16-10A0A075B7F0 116 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 TRBV4-1A0A0J9YWV2 114 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 IGHV3-64DA0A0J9YX35 117 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 IFNL4K9M1U5 179 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 DCTN6O00399 190 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 TXNDC12O95881 172 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 IGHV4-38-2P0DP08 117 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 RPS2P15880 293 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 CENPAP49450 140 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 HIST1H3AP68431 136 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 SEC23BQ15437 767 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 HIST2H3PS2Q5TEC6 136 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 DPY19L2P2Q6ZN68 376 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 HIST2H3AQ71DI3 136 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 BHLHE23Q8NDY6 225 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 GJC3Q8NFK1 279 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 ZNF582Q96NG8 517 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 COQ7Q99807 217 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 SLC30A2Q9BRI3 323 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 MS4A7Q9GZW8 240 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 HDHD2Q9H0R4 259 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 WDR76Q9H967 626 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 RPS6KA6Q9UK32 745 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 AURKCQ9UQB9 309 aa17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 FAM32AQ9Y421 112 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-208ENST00000616074 UNC119BA6NIH7 251 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 F5H5P2 479 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 DIRAS1O95057 198 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 RHCEP18577 417 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 SRP9P49458 86 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 NUDT2P50583 147 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 RPS6KA3P51812 740 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 DBPQ10586 325 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 PRR31Q5SQ13 230 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms