RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TMEM178BH3BS89 294 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 IFNL4K9M1U5 179 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 IMPA2O14732 288 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 RER1O15258 196 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 OMPP47874 163 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 MMP16P51512 607 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 KCNMB1Q16558 191 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 ESCO2Q56NI9 601 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 SLC27A4Q6P1M0 643 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 FBXW12Q6X9E4 464 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 HACD2Q6Y1H2 254 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 PTCHD4Q6ZW05 846 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 DOK3Q7L591 496 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 MUC20Q8N307 709 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-215ENST00000612337 OR5L1Q8NGL2 311 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 RSRC1Q96IZ7 334 aaKnown RBP14.94□□□□□ -0.02
SSBP1-215ENST00000612337 KCTD14Q9BQ13 255 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-215ENST00000612337 NUAK2Q9H093 628 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 RPS6KA6Q9UK32 745 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 FAM32AQ9Y421 112 aaKnown RBP14.94□□□□□ -0.02
SSBP1-215ENST00000612337 IER3IP1Q9Y5U9 82 aa14.94□□□□□ -0.02
SSBP1-215ENST00000612337 CMYA5Q8N3K9 4069 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 SOCS2O14508 198 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 CCDC22O60826 627 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 TXNDC12O95881 172 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 DBHP09172 617 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 NCK1P16333 377 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 RHCEP18577 417 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 FXYD6P3P58550 94 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 HLXQ14774 488 aaPredicted RBP14.93□□□□□ -0.02
SSBP1-215ENST00000612337 FGD3Q5JSP0 725 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 KLF17Q5JT82 389 aaPredicted RBP14.93□□□□□ -0.02
SSBP1-215ENST00000612337 OR2T2Q6IF00 324 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 PGM2L1Q6PCE3 622 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 DPY19L2P2Q6ZN68 376 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 OR5AS1Q8N127 324 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 ATG16L2Q8NAA4 619 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 OR13G1Q8NGZ3 307 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 GPA33Q99795 319 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 MRI1Q9BV20 369 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 PTTG3PQ9NZH4 202 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 NDUFAF4Q9P032 175 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 ABCD2Q9UBJ2 740 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 ZNF69Q9UC07 566 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 IL20RAQ9UHF4 553 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 LRCH1Q9Y2L9 728 aa14.93□□□□□ -0.02
SSBP1-215ENST00000612337 TRBV4-1A0A0J9YWV2 114 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 CEACAM18A8MTB9 384 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 HKR1P10072 659 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 CPT2P23786 658 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 PRTN3P24158 256 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 CDKN2AP42771 156 aaKnown RBP14.92□□□□□ -0.02
SSBP1-215ENST00000612337 RPS6KA3P51812 740 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 HIST1H3AP68431 136 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 HIST2H3PS2Q5TEC6 136 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 HIST2H3AQ71DI3 136 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 GJC3Q8NFK1 279 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 OR8G5Q8NG78 346 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 OR10AD1Q8NGE0 317 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 APOBEC3DQ96AK3 386 aaPredicted RBP14.92□□□□□ -0.02
SSBP1-215ENST00000612337 MEGF10Q96KG7 1140 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 COQ7Q99807 217 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 HDHD2Q9H0R4 259 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 ZMAT3Q9HA38 289 aaKnown RBP14.92□□□□□ -0.02
SSBP1-215ENST00000612337 KRCC1Q9NPI7 259 aaPredicted RBP14.92□□□□□ -0.02
SSBP1-215ENST00000612337 OR5V1Q9UGF6 321 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 AURKCQ9UQB9 309 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 POLR1DQ9Y2S0 133 aa14.92□□□□□ -0.02
SSBP1-215ENST00000612337 UNC119BA6NIH7 251 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 WNT2P09544 360 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 CRABP1P29762 137 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 SRP9P49458 86 aaKnown RBP14.91□□□□□ -0.02
SSBP1-215ENST00000612337 NUDT2P50583 147 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 PAX8Q06710 450 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 FOXL1Q12952 345 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 SEC23BQ15437 767 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 DNM1P34Q6PK57 102 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 SMARCD3Q6STE5 483 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 C7orf34Q96L11 122 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 DHRS1Q96LJ7 313 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 ZNF582Q96NG8 517 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-215ENST00000612337 TSSK2Q96PF2 358 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 SLC30A2Q9BRI3 323 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 ZNF747Q9BV97 191 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 TMEM165Q9HC07 324 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 LHFPL6Q9Y693 200 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 DOCK11Q5JSL3 2073 aa14.91□□□□□ -0.02
SSBP1-215ENST00000612337 DNAJC9-AS1A6NH13 148 aa14.9□□□□□ -0.02
SSBP1-215ENST00000612337 DCTN6O00399 190 aa14.9□□□□□ -0.02
SSBP1-215ENST00000612337 GPANK1O95872 356 aa14.9□□□□□ -0.02
SSBP1-215ENST00000612337 PAX2Q02962 417 aa14.9□□□□□ -0.02
SSBP1-215ENST00000612337 MEP1BQ16820 701 aa14.9□□□□□ -0.02
SSBP1-215ENST00000612337 BCL6BQ8N143 479 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-215ENST00000612337 ZNF420Q8TAQ5 688 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-215ENST00000612337 ZNF48Q96MX3 618 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-215ENST00000612337 FUZQ9BT04 418 aa14.9□□□□□ -0.02
SSBP1-215ENST00000612337 SSBP3Q9BWW4 388 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-215ENST00000612337 DCAF13Q9NV06 445 aaKnown RBP14.9□□□□□ -0.02
SSBP1-215ENST00000612337 SAMD4AQ9UPU9 718 aaKnown RBP14.9□□□□□ -0.02
SSBP1-215ENST00000612337 PCDHGB1Q9Y5G3 927 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms