RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RFPL4AA6NLU0 287 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 RFPL4AL1F8VTS6 287 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-207ENST00000612273 CD96P40200 585 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 CSNK1EP49674 416 aaKnown RBP12.57□□□□□ -0.4
COL6A1-207ENST00000612273 EPHA4P54764 986 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 SLC29A4Q7RTT9 530 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 LHFPL5Q8TAF8 219 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 ADIPOR1Q96A54 375 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 LAT2Q9GZY6 243 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 MMP17Q9ULZ9 603 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 HRH3Q9Y5N1 445 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 DMDP11532 3685 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 FRYQ5TBA9 3013 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 A0A0B4J2A0 478 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 PMS2P2O95744 297 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 TXNDC12O95881 172 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 FOLR1P15328 257 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 MPGP29372 298 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 PRSS12P56730 875 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 TLE3Q04726 772 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 CCINQ13939 588 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 SGCBQ16585 318 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 PTCRAQ6ISU1 281 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-207ENST00000612273 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 PAQR8Q8TEZ7 354 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 C8orf44Q96CB5 159 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 ADAT3Q96EY9 351 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-207ENST00000612273 TMPRSS13Q9BYE2 586 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 TXNIPQ9H3M7 391 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 ZNF275Q9NSD4 429 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-207ENST00000612273 SLC39A1Q9NY26 324 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 SHPKQ9UHJ6 478 aa12.57□□□□□ -0.4
COL6A1-207ENST00000612273 A8MXK9 166 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 TOR1AO14656 332 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 STK17BO94768 372 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 MPIG6BO95866 241 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 ITGB2P05107 769 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 NPY4RP50391 375 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 DHODHQ02127 395 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 ZNF169Q14929 603 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-207ENST00000612273 EMC4Q5J8M3 183 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 HDDC2Q7Z4H3 204 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 PRRC2CQ9Y520 2896 aaKnown RBP12.56□□□□□ -0.4
COL6A1-207ENST00000612273 WIPF3A6NGB9 483 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 GPR31O00270 319 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 PLPP3O14495 311 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 SYT7O43581 403 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 MRPS21P82921 87 aaKnown RBP12.56□□□□□ -0.4
COL6A1-207ENST00000612273 AWAT2Q6E213 333 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 OR10H5Q8NGA6 315 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 OR52H1Q8NGJ2 320 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 OR1L3Q8NH93 324 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 OR51E1Q8TCB6 317 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 FBRSQ9HAH7 460 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 GSKIPQ9P0R6 139 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 A0A1W2PPC4 97 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 SDCBPO00560 298 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-207ENST00000612273 FGF2P09038 288 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 NAT1P18440 290 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 ANOS1P23352 680 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 BIDP55957 195 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 ANGPTL5Q86XS5 388 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 OR1S2Q8NGQ3 325 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 S1PR5Q9H228 398 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 ELL3Q9HB65 397 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-207ENST00000612273 RABL2AQ9UBK7 228 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-207ENST00000612273 RABL2BQ9UNT1 228 aa12.56□□□□□ -0.4
COL6A1-207ENST00000612273 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 A8MVM7 634 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 AGPAT2O15120 278 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 ADAP1O75689 374 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 ELOCQ15369 112 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 OR2W3Q7Z3T1 314 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 GPER1Q99527 375 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 VN1R1Q9GZP7 353 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-207ENST00000612273 A0A1W2PNR3 127 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 METTL21EPA6NDL7 271 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 HPP00738 406 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 PGAM2P15259 253 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 FBLP22087 321 aaKnown RBP12.55□□□□□ -0.4
COL6A1-207ENST00000612273 SFTPDP35247 375 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 TMEM104Q8NE00 496 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 THAP6Q8TBB0 222 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 MRPL38Q96DV4 380 aaKnown RBP12.55□□□□□ -0.4
COL6A1-207ENST00000612273 UTP23Q9BRU9 249 aaKnown RBP12.55□□□□□ -0.4
COL6A1-207ENST00000612273 VSX1Q9NZR4 365 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-207ENST00000612273 GPN3Q9UHW5 284 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-207ENST00000612273 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
COL6A1-207ENST00000612273 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
COL6A1-207ENST00000612273 ZNF205O95201 554 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms