RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PBOV1Q9GZY1 135 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 PTTG3PQ9NZH4 202 aa11.84□□□□□ -0.51
TCF3-220ENST00000611869 LSM2Q9Y333 95 aaKnown RBP11.84□□□□□ -0.51
TCF3-220ENST00000611869 SEMA7AO75326 666 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 CD3DP04234 171 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 NFYAP23511 347 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 SKP2Q13309 424 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 GK2Q14410 553 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 FAM76BQ5HYJ3 339 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 PGAP1Q75T13 922 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 DND1Q8IYX4 353 aaKnown RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 GTPBP8Q8N3Z3 284 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 OR4D9Q8NGE8 314 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 ZPLD1Q8TCW7 415 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 HAO2Q9NYQ3 351 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 LRFN1Q9P244 771 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 ABHD16AO95870 558 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 LPLP06858 475 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 IL32P24001 234 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 LTBRP36941 435 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 PPA1Q15181 289 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 MESTQ5EB52 335 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 FNDC1Q4ZHG4 1894 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 UTRNP46939 3433 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 SLC22A23A1A5C7 686 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 AKR7A2O43488 359 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 STK17BO94768 372 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 DYRK1AQ13627 763 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 ZSCAN4Q8NAM6 433 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 CDX2Q99626 313 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 SLCO5A1Q9H2Y9 848 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 EXOSC3Q9NQT5 275 aaKnown RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 MRM2Q9UI43 246 aaKnown RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 ICAM5Q9UMF0 924 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 GPR179Q6PRD1 2367 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 MN1Q10571 1320 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 A0A1B0GV50 99 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 ANKRD30BLA7E2S9 258 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 HSPB6O14558 160 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 ZNF44P15621 663 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 ALOX5APP20292 161 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 FKBP2P26885 142 aaKnown RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 GZMKP49863 264 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 NPY4RP50391 375 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 MMP15P51511 669 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
TCF3-220ENST00000611869 C9orf40Q8IXQ3 194 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 MKXQ8IYA7 352 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 RADILQ96JH8 1075 aa11.83□□□□□ -0.52
TCF3-220ENST00000611869 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
TCF3-220ENST00000611869 BORCS7-ASMTA0A0B4J1R7 106 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 TCRBV16S1A1N1A0A5B0 115 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 S100A6P06703 90 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 CPT2P23786 658 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 ZNF79Q15937 498 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 DOK3Q7L591 496 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 MDGA2Q7Z553 956 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 BPHLQ86WA6 291 aaPredicted RBP11.82□□□□□ -0.52
TCF3-220ENST00000611869 MAFAQ8NHW3 353 aaPredicted RBP11.82□□□□□ -0.52
TCF3-220ENST00000611869 STOML3Q8TAV4 291 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 FAM86C1Q9NVL1 165 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 MRPS18AQ9NVS2 196 aaKnown RBP11.82□□□□□ -0.52
TCF3-220ENST00000611869 OCIAD1Q9NX40 245 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 TMEM221A6NGB7 291 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 M0R135 149 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 CCSO14618 274 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 TNFSF11O14788 317 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
TCF3-220ENST00000611869 TGFBR3Q03167 851 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 BEND4Q6ZU67 534 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 CARFQ8N187 725 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 GABRG1Q8N1C3 465 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 BHLHE23Q8NDY6 225 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 FNDC9Q8TBE3 224 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 ZNF799Q96GE5 643 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 SLC25A21Q9BQT8 299 aaPredicted RBP11.82□□□□□ -0.52
TCF3-220ENST00000611869 GPR173Q9NS66 373 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 PTPRDP23468 1912 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 PATE3B3GLJ2 98 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 PTP4A3O75365 173 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 RHOUQ7L0Q8 258 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 IL1F10Q8WWZ1 152 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 PTDSS2Q9BVG9 487 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 NUP50Q9UKX7 468 aa11.82□□□□□ -0.52
TCF3-220ENST00000611869 RTTNQ86VV8 2226 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 HSPB2A8KAH6 182 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
TCF3-220ENST00000611869 SLC17A2O00624 439 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 CCL4P13236 92 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 PTGS2P35354 604 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 EFNA3P52797 238 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZNF121P58317 390 aaPredicted RBP11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZNF616Q08AN1 781 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 HSPB2Q16082 182 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 FJX1Q86VR8 437 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 RFLNBQ8N5W9 214 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 SGCZQ96LD1 299 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms