RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NPY4RP50391 375 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 MAP2K6P52564 334 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 FOXF1Q12946 379 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 ARL6IP1Q15041 203 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 DMRTC1Q5HYR2 192 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 FAM199XQ6PEV8 388 aaPredicted RBP7.81□□□□□ -1.16
LIG4-204ENST00000611712 PXT1Q8NFP0 134 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 OR56B1Q8NGI3 324 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SPTSSAQ969W0 71 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 COL4A4P53420 1690 aaPredicted RBP7.81□□□□□ -1.16
LIG4-204ENST00000611712 FAM230AA0A1W2PPH8 454 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 F8W036 122 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SULT1C2O00338 296 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 FARS2O95363 451 aaKnown RBP7.81□□□□□ -1.16
LIG4-204ENST00000611712 S100A9P06702 114 aaKnown RBP7.81□□□□□ -1.16
LIG4-204ENST00000611712 GLB1P16278 677 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 BLVRBP30043 206 aaPredicted RBP7.81□□□□□ -1.16
LIG4-204ENST00000611712 BLOC1S1P78537 153 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 NR0B2Q15466 257 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 GPR137CQ8N3F9 429 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SPICQ8N5J4 248 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 OR11H4Q8NGC9 324 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 OR14L1PQ8NHC6 308 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SLC25A38Q96DW6 304 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 DHRS9Q9BPW9 319 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 ULBP2Q9BZM5 246 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 GLS2Q9UI32 602 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SLC7A11Q9UPY5 501 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 B3GALT5Q9Y2C3 310 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 A0A0B4J2A0 478 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 IGHV1OR15-9A0A0B4J2B8 117 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 LYSMD4Q5XG99 296 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 OR11G2Q8NGC1 345 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 ARL11Q969Q4 196 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 DUSP23Q9BVJ7 150 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SLC22A11Q9NSA0 550 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 CLEC1BQ9P126 229 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SHPKQ9UHJ6 478 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 NOTCH4Q99466 2003 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 IGHV1OR21-1A0A087WYE8 117 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 TMEM200CA6NKL6 621 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 MCRIP1C9JLW8 97 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 LGALS8O00214 317 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 PIAS2O75928 621 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 P04436 131 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 CHRM2P08172 466 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 ZNF250P15622 560 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 GNB3P16520 340 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 LAP3P28838 519 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 EFNB2P52799 333 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SNU13P55769 128 aaKnown RBP7.81□□□□□ -1.16
LIG4-204ENST00000611712 FXYD4P59646 89 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 OR1J2Q8NGS2 313 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 ZNRF4Q8WWF5 429 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 C11orf40Q8WZ69 217 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 PBOV1Q9GZY1 135 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 CHRDQ9H2X0 955 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 C12orf10Q9HB07 376 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SCN8AQ9UQD0 1980 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 PLPP3O14495 311 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 AGPAT2O15120 278 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 NUDT21O43809 227 aaKnown RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 RAD51DO75771 328 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 WNT11O96014 354 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 CD1AP06126 327 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ACSM4P0C7M7 580 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ASAH2BP0C7U1 165 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 FCGR2AP12318 317 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ADH6P28332 368 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 MSX1P28360 303 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 OTX2P32243 289 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 HRH1P35367 487 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ARHGDIBP52566 201 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 LIMK1P53667 647 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 SCAND1P57086 179 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 SFRP5Q5T4F7 317 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 LPCAT3Q6P1A2 487 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 OPN5Q6U736 354 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 SGPP2Q8IWX5 399 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 GPR137Q96N19 417 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 PHF7Q9BWX1 381 aaPredicted RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 NARFLQ9H6Q4 476 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ZNF442Q9H7R0 627 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ALKBH4Q9NXW9 302 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 KLHL13Q9P2N7 655 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ELF5Q9UKW6 265 aaPredicted RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 LSM5Q9Y4Y9 91 aaKnown RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 COL4A6Q14031 1691 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 OR2J2O76002 312 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 QDPRP09417 244 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 SLC35A1P78382 337 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 HLXQ14774 488 aaPredicted RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 FAM74A1Q5RGS3 127 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 OR52W1Q6IF63 320 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 TMEM229BQ8NBD8 167 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 CMBLQ96DG6 245 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ARL5BQ96KC2 179 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 TRAF4Q9BUZ4 470 aaPredicted RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 GPR84Q9NQS5 396 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms